Summary information of deep learning profile DL0056.1

This page shows the summary of all deep learning-derived profiles and motifs for TBP. Please scroll down the page to browse individual datasets.

Profile summary

Name: TBP
Profile ID: DL0056.1
Class: TATA-binding proteins
Family: TBP-related factors
JASPAR ID: MA0108.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: nan  
Source: ENCODE
Number of datasets: 4
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.02 0.01 0.02 0.01 0.03 0.01 0.02 0.00 0.04 0.01 0.19 0.00 0.02 0.02 0.01 0.04 0.02 ]
G [ 0.02 0.02 0.02 0.03 0.01 0.02 0.04 0.05 0.08 0.10 0.00 0.17 0.07 0.03 0.04 0.02 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5540

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 887

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 3230

4 models found for TBP

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000992.1 TBP ENCSR000DZZ GM12878 Homo sapiens MA0108.3
BP000993.1 TBP ENCSR000ECB H1 Homo sapiens MA0108.3
BP000994.1 TBP ENCSR000EDD HeLa-S3 Homo sapiens MA0108.3
BP000995.1 TBP ENCSR000EEL HepG2 Homo sapiens MA0108.3
Showing 4 profiles of page 1 from 1 pages
  • 1 (current)