Summary information of deep learning profile DL0053.1

This page shows the summary of all deep learning-derived profiles and motifs for HNF4A. Please scroll down the page to browse individual datasets.

Profile summary

Name: HNF4A
Profile ID: DL0053.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA0114.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P41235  
Source: ENCODE
Number of datasets: 5
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.01 0.00 0.02 0.07 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 0.02 0.19 0.00 -0.00 0.00 -0.00 0.00 0.02 0.11 0.02 0.01 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.12 0.03 -0.00 -0.00 -0.00 -0.00 -0.00 0.13 0.01 -0.00 -0.00 -0.00 0.00 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.01 0.05 -0.00 -0.00 -0.00 -0.00 0.10 0.09 0.12 -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.01 -0.00 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5006

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 20603

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3622

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 5217

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 9674

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 6449

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1828

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 767

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 6520

5 models found for HNF4A

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000977.1 HNF4A ENCSR000BLF HepG2 Homo sapiens MA0114.5
BP000978.1 HNF4A ENCSR000EEU HepG2 Homo sapiens MA0114.5
BP000979.1 HNF4A ENCSR445QRF liver Homo sapiens MA0114.5
BP000980.1 HNF4A ENCSR469FBY HepG2 Homo sapiens MA0114.5
BP000981.1 HNF4A ENCSR601OGE liver Homo sapiens MA0114.5
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