Summary information of deep learning profile DL0044.1

This page shows the summary of all deep learning-derived profiles and motifs for RFX5. Please scroll down the page to browse individual datasets.

Profile summary

Name: RFX5
Profile ID: DL0044.1
Class: Fork head/winged helix factors
Family: RFX-related factors
JASPAR ID: MA0510.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P48382  
Source: ENCODE
Number of datasets: 8
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.07 0.00 0.00 0.00 0.00 0.11 -0.00 -0.00 0.00 0.00 -0.00 ]
C [ 0.02 0.02 0.01 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.07 0.00 0.04 0.02 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.03 -0.00 0.05 0.00 -0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.01 0.04 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.06 0.00 0.00 0.00 -0.00 0.11 0.00 -0.00 0.01 0.00 0.00 -0.00 0.02 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 16210

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 18938

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 6770

8 models found for RFX5

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000913.1 RFX5 ENCSR000DZW GM12878 Homo sapiens MA0510.3
BP000914.1 RFX5 ENCSR000ECF H1 Homo sapiens MA0510.3
BP000915.1 RFX5 ENCSR000EEA HepG2 Homo sapiens MA0510.3
BP000916.1 RFX5 ENCSR000EFD IMR-90 Homo sapiens MA0510.3
BP000917.1 RFX5 ENCSR000EGO K562 Homo sapiens MA0510.3
BP000918.1 RFX5 ENCSR000EHY SK-N-SH Homo sapiens MA0510.3
BP000919.1 RFX5 ENCSR064LJN A549 Homo sapiens MA0510.3
BP000920.1 RFX5 ENCSR924TVL MCF-7 Homo sapiens MA0510.3
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