Summary information of deep learning profile DL0038.1

This page shows the summary of all deep learning-derived profiles and motifs for PAX5. Please scroll down the page to browse individual datasets.

Profile summary

Name: PAX5
Profile ID: DL0038.1
Class: Paired box factors
Family: Paired domain only
JASPAR ID: MA0014.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02548  
Source: ENCODE
Number of datasets: 4
Models: BPNet

Sequence logo

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 0.07 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 0.01 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.02 -0.00 0.00 0.07 0.00 0.11 -0.00 0.13 -0.00 0.05 0.03 0.00 0.02 0.01 -0.00 0.03 0.00 0.04 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.08 -0.00 -0.00 0.00 -0.00 0.21 0.01 0.00 -0.00 0.06 0.05 0.01 0.00 0.09 0.01 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.04 0.02 -0.01 0.01 0.00 -0.00 0.03 0.08 -0.00 -0.00 -0.00 0.06 -0.00 -0.00 0.00 0.02 -0.00 ]

Common motifs

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3130

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3411

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1788

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1930

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1364

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 757

4 models found for PAX5

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000882.1 PAX5 ENCSR000BHD GM12878 Homo sapiens MA0014.4
BP000883.1 PAX5 ENCSR000BHJ GM12878 Homo sapiens MA0014.4
BP000884.1 PAX5 ENCSR000BJH GM12891 Homo sapiens MA0014.4
BP000885.1 PAX5 ENCSR000BJI GM12892 Homo sapiens MA0014.4
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