JASPAR - STAT1 - BP001066.1

This page shows detailed deep learning-derived predictions and motifs for STAT1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	STAT1
Model ID:	BP001066.1
Cell line/tissue:	K562
Class:	STAT domain factors
Family:	STAT factors
JASPAR ID:	MA0137.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q53XW4
Source:	ENCSR000FAV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 607

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.03	0.04	0.01	-0.00	-0.00	0.00	0.00	]
C [	0.00	0.01	-0.00	0.00	-0.00	-0.00	0.02	0.02	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.02	0.03	-0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	]
T [	0.00	-0.00	-0.00	0.01	0.04	0.04	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.01	-0.00	-0.00	-0.00	]

Frequency matrix

A [	143	157	152	170	141	137	192	216	223	155	114	151	172	130	142	125	58	68	304	66	2	7	82	8	126	191	23	528	575	360	120	90	159	111	173	143	115	185	148	126	170	172	119	129	130	171	143	134	183	192	]
C [	140	173	164	126	115	109	121	129	110	105	140	186	190	218	172	190	183	301	101	200	2	5	460	493	195	23	10	27	14	57	141	212	163	244	178	136	173	177	198	167	117	133	155	218	230	148	167	155	158	164	]
G [	131	107	132	178	225	241	194	151	121	168	203	131	133	130	140	182	124	147	128	122	2	12	8	9	133	371	542	20	8	132	84	214	152	150	127	148	187	123	126	122	106	126	106	127	129	119	146	166	131	118	]
T [	193	170	159	133	126	120	100	111	153	179	150	139	112	129	153	110	242	91	74	219	601	583	57	97	153	22	32	32	10	58	262	91	133	102	129	180	132	122	135	192	214	176	227	133	118	169	151	152	135	133	]

Hypothetical CWM

A [	-0.01	-0.00	-0.02	-0.01	0.01	-0.02	-0.03	-0.01	0.00	-0.03	-0.02	0.00	-0.01	0.03	0.04	0.02	-0.01	-0.01	0.00	-0.00	0.00	]
C [	0.00	-0.01	0.01	0.01	-0.01	0.01	-0.02	-0.03	0.02	0.03	0.01	-0.01	-0.03	-0.02	-0.02	-0.01	0.01	0.01	-0.00	0.01	0.00	]
G [	0.00	0.01	-0.00	0.00	0.01	-0.01	-0.02	-0.02	-0.03	-0.02	0.02	0.02	0.03	-0.02	-0.02	0.00	-0.01	0.01	0.01	-0.00	-0.00	]
T [	0.00	-0.00	0.01	-0.01	-0.01	0.01	0.05	0.04	-0.00	0.00	-0.01	-0.03	-0.00	-0.01	-0.02	-0.02	0.01	-0.01	-0.01	-0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 304

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 165

CWM

PFM

HCWM

4 profiles found for the same TF (STAT1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001062.1	STAT1	ENCSR000EHJ	K562	Homo sapiens	MA0137.4
BP001063.1	STAT1	ENCSR000EHK	K562	Homo sapiens	MA0137.4
BP001064.1	STAT1	ENCSR000EZK	HeLa-S3	Homo sapiens	MA0137.4
BP001065.1	STAT1	ENCSR000FAU	K562	Homo sapiens	MA0517.2