JASPAR - STAT1 - BP001066.1

This page shows detailed deep learning-derived predictions and motifs for STAT1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	STAT1
Model ID:	BP001066.1
Cell line/tissue:	K562
Class:	STAT domain factors
Family:	STAT factors
JASPAR ID:	MA0137.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q53XW4
Source:	ENCSR000FAV
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 607

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	0.01	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.04	0.04	0.01	-0.00	-0.00	0.00	]
C [	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.03	0.02	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.02	0.02	-0.00	-0.00	0.00	-0.00	0.01	0.00	]
T [	0.00	0.00	-0.00	-0.00	0.01	0.04	0.03	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	]

Frequency matrix

A [	133	135	152	151	169	118	133	227	176	214	192	135	122	132	180	129	102	133	91	262	58	10	32	32	22	153	97	57	583	601	219	74	91	242	110	153	129	112	139	150	179	153	111	100	120	126	133	159	170	193	]
C [	118	131	166	146	119	129	127	106	126	106	122	126	123	187	148	127	150	152	214	84	132	8	20	542	371	133	9	8	12	2	122	128	147	124	182	140	130	133	131	203	168	121	151	194	241	225	178	132	107	131	]
G [	164	158	155	167	148	230	218	155	133	117	167	198	177	173	136	178	244	163	212	141	57	14	27	10	23	195	493	460	5	2	200	101	301	183	190	172	218	190	186	140	105	110	129	121	109	115	126	164	173	140	]
T [	192	183	134	143	171	130	129	119	172	170	126	148	185	115	143	173	111	159	90	120	360	575	528	23	191	126	8	82	7	2	66	304	68	58	125	142	130	172	151	114	155	223	216	192	137	141	170	152	157	143	]

Hypothetical CWM

A [	-0.01	-0.00	-0.01	-0.01	0.01	-0.02	-0.02	-0.01	-0.00	-0.03	-0.01	0.00	-0.00	0.04	0.05	0.01	-0.01	-0.01	0.01	-0.00	0.00	]
C [	-0.00	-0.00	0.01	0.01	-0.01	0.00	-0.02	-0.02	0.03	0.02	0.02	-0.02	-0.03	-0.02	-0.02	-0.01	0.01	0.00	-0.00	0.01	0.00	]
G [	0.00	0.01	-0.00	0.01	0.01	-0.01	-0.02	-0.02	-0.03	-0.01	0.01	0.03	0.02	-0.03	-0.02	0.01	-0.01	0.01	0.01	-0.01	0.00	]
T [	0.00	-0.00	0.00	-0.01	-0.01	0.02	0.04	0.03	-0.01	0.00	-0.02	-0.03	0.00	-0.01	-0.03	-0.02	0.01	-0.01	-0.02	-0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 304

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 165

CWM

PFM

HCWM

4 profiles found for the same TF (STAT1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001062.1	STAT1	ENCSR000EHJ	K562	Homo sapiens	MA0137.4
BP001063.1	STAT1	ENCSR000EHK	K562	Homo sapiens	MA0137.4
BP001064.1	STAT1	ENCSR000EZK	HeLa-S3	Homo sapiens	MA0137.4
BP001065.1	STAT1	ENCSR000FAU	K562	Homo sapiens	MA0517.2