Detailed information of deep learning profile BP001033.1

This page shows detailed deep learning-derived predictions and motifs for ATF4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF4
Model ID: BP001033.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: ATF-4-related factors
JASPAR ID: MA0833.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18848  
Source: ENCSR288ZFV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 0.01 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 161 137 151 161 172 166 153 158 179 154 148 164 171 179 164 154 168 184 199 212 145 315 10 5 568 4 1 2 592 590 9 220 157 122 141 140 155 164 166 199 162 157 171 139 196 155 153 161 158 156 ]
C [ 136 124 150 135 152 145 156 136 128 142 149 159 134 134 134 123 133 124 94 54 88 207 1 5 0 58 0 594 2 1 176 218 140 177 128 149 160 143 137 118 150 142 117 135 112 130 153 141 134 139 ]
G [ 145 175 136 138 134 144 148 147 139 151 140 134 127 137 151 165 154 150 129 250 295 64 0 567 7 2 595 0 2 0 54 74 132 114 143 161 147 153 147 152 142 132 156 135 127 161 151 136 135 128 ]
T [ 156 162 161 164 140 143 141 157 152 151 161 141 166 148 149 156 143 140 176 82 70 12 587 21 23 534 2 2 2 7 359 86 169 185 186 148 136 138 148 129 144 167 154 189 163 152 141 160 171 175 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.01 -0.00 -0.00 0.01 0.01 -0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.01 0.00 -0.01 0.01 -0.01 -0.01 0.00 0.00 -0.00 0.00 0.00 ]
G [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.01 0.01 -0.01 -0.00 -0.01 -0.00 -0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 109

4 profiles found for the same TF (ATF4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001031.1 ATF4 ENCSR044UJJ K562 Homo sapiens MA0833.3
BP001032.1 ATF4 ENCSR145TSJ K562 Homo sapiens MA0833.3
BP001034.1 ATF4 ENCSR803PAI HepG2 Homo sapiens MA0833.3
BP001035.1 ATF4 ENCSR965SHB HepG2 Homo sapiens MA0833.3
Showing 4 profiles of page 1 from 1 pages
  • 1 (current)