JASPAR - ATF4 - BP001031.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF4
Model ID:	BP001031.1
Cell line/tissue:	K562
Class:	Basic leucine zipper factors (bZIP)
Family:	ATF-4-related factors
JASPAR ID:	MA0833.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P18848
Source:	ENCSR044UJJ
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5293

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.01	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.06	0.06	-0.00	0.00	-0.00	-0.00	]
C [	0.00	-0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.04	0.00	-0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.00	0.00	0.05	-0.00	-0.00	0.08	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.05	0.00	0.00	0.04	0.00	0.00	0.00	-0.00	0.01	-0.00	0.00	0.00	]

Frequency matrix

A [	1378	1466	1390	1468	1416	1407	1487	1392	1453	1436	1614	1492	1482	1863	1892	1251	2755	110	60	4741	53	16	1070	4988	5239	162	1872	1406	1183	1402	1431	1107	1454	1978	2652	1666	1311	1445	1329	1509	1512	1366	1469	1562	1696	1352	1481	1411	1452	1480	]
C [	1262	1260	1283	1226	1256	1156	1210	1300	1162	1178	1117	1135	1183	882	591	830	1604	58	77	124	540	4	3397	286	5	1562	1666	1187	1448	1224	1052	973	1266	1416	888	1094	1369	1234	1264	1151	1205	1136	1264	1256	1155	1242	1217	1234	1209	1202	]
G [	1256	1301	1257	1279	1367	1231	1212	1174	1205	1400	1255	1441	1336	1253	1885	2257	827	45	4915	197	183	5251	8	10	34	749	776	1244	1118	1266	1282	2047	1368	833	874	1096	1157	1198	1188	1295	1238	1407	1281	1155	1183	1275	1243	1315	1250	1189	]
T [	1397	1266	1363	1320	1254	1499	1384	1427	1473	1279	1307	1225	1292	1295	925	955	107	5080	241	231	4517	22	818	9	15	2820	979	1456	1544	1401	1528	1166	1205	1066	879	1437	1456	1416	1512	1338	1338	1384	1279	1320	1259	1424	1352	1333	1382	1422	]

Hypothetical CWM

A [	0.00	0.01	0.01	-0.00	0.02	-0.02	-0.02	0.04	-0.05	-0.02	0.02	0.06	0.06	-0.03	0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.00	0.01	0.02	0.01	-0.02	-0.02	0.05	-0.05	0.05	0.01	-0.04	0.03	0.01	0.01	0.01	0.01	]
G [	0.01	0.00	0.01	0.02	0.01	-0.03	0.05	-0.01	-0.02	0.08	-0.07	-0.03	-0.02	0.01	0.01	0.02	0.01	0.01	]
T [	0.00	-0.00	-0.00	0.00	-0.03	0.05	0.00	-0.01	0.04	-0.00	0.01	-0.05	-0.02	0.02	-0.01	0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1550

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 783

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 621

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 199

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 156

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 82

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 70

CWM

PFM

HCWM

4 profiles found for the same TF (ATF4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001032.1	ATF4	ENCSR145TSJ	K562	Homo sapiens	MA0833.3
BP001033.1	ATF4	ENCSR288ZFV	HepG2	Homo sapiens	MA0833.3
BP001034.1	ATF4	ENCSR803PAI	HepG2	Homo sapiens	MA0833.3
BP001035.1	ATF4	ENCSR965SHB	HepG2	Homo sapiens	MA0833.3