JASPAR - ATF4 - BP001031.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF4
Model ID:	BP001031.1
Cell line/tissue:	K562
Class:	Basic leucine zipper factors (bZIP)
Family:	ATF-4-related factors
JASPAR ID:	MA0833.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P18848
Source:	ENCSR044UJJ
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5293

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.01	-0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.05	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.08	-0.00	-0.00	0.05	0.00	0.00	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	-0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.01	0.00	-0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.06	0.06	0.00	-0.00	-0.00	0.04	0.00	-0.00	0.01	-0.00	0.00	0.00	]

Frequency matrix

A [	1422	1382	1333	1352	1424	1259	1320	1279	1384	1338	1338	1512	1416	1456	1437	879	1066	1205	1166	1528	1401	1544	1456	979	2820	15	9	818	22	4517	231	241	5080	107	955	925	1295	1292	1225	1307	1279	1473	1427	1384	1499	1254	1320	1363	1266	1397	]
C [	1189	1250	1315	1243	1275	1183	1155	1281	1407	1238	1295	1188	1198	1157	1096	874	833	1368	2047	1282	1266	1118	1244	776	749	34	10	8	5251	183	197	4915	45	827	2257	1885	1253	1336	1441	1255	1400	1205	1174	1212	1231	1367	1279	1257	1301	1256	]
G [	1202	1209	1234	1217	1242	1155	1256	1264	1136	1205	1151	1264	1234	1369	1094	888	1416	1266	973	1052	1224	1448	1187	1666	1562	5	286	3397	4	540	124	77	58	1604	830	591	882	1183	1135	1117	1178	1162	1300	1210	1156	1256	1226	1283	1260	1262	]
T [	1480	1452	1411	1481	1352	1696	1562	1469	1366	1512	1509	1329	1445	1311	1666	2652	1978	1454	1107	1431	1402	1183	1406	1872	162	5239	4988	1070	16	53	4741	60	110	2755	1251	1892	1863	1482	1492	1614	1436	1453	1392	1487	1407	1416	1468	1390	1466	1378	]

Hypothetical CWM

A [	0.00	0.01	0.01	-0.01	0.02	-0.02	-0.05	0.01	-0.00	0.04	-0.01	0.00	0.05	-0.03	0.00	-0.00	-0.00	0.00	]
C [	0.01	0.01	0.02	0.01	0.01	-0.02	-0.03	-0.07	0.08	-0.02	-0.01	0.05	-0.03	0.01	0.02	0.01	0.00	0.01	]
G [	0.01	0.01	0.01	0.01	0.03	-0.04	0.01	0.05	-0.05	0.05	-0.02	-0.02	0.01	0.02	0.01	0.00	0.01	0.01	]
T [	-0.00	-0.00	-0.00	0.01	-0.03	0.06	0.06	0.02	-0.02	-0.05	0.04	-0.02	-0.02	0.02	-0.00	0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1550

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 783

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 621

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 199

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 156

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 82

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 70

CWM

PFM

HCWM

4 profiles found for the same TF (ATF4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001032.1	ATF4	ENCSR145TSJ	K562	Homo sapiens	MA0833.3
BP001033.1	ATF4	ENCSR288ZFV	HepG2	Homo sapiens	MA0833.3
BP001034.1	ATF4	ENCSR803PAI	HepG2	Homo sapiens	MA0833.3
BP001035.1	ATF4	ENCSR965SHB	HepG2	Homo sapiens	MA0833.3