Detailed information of deep learning profile BP001010.1

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This page shows detailed deep learning-derived predictions and motifs for CREM in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREM
Model ID: BP001010.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0609.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q03060  
Source: ENCSR077DKV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.04 0.00 -0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 657 678 717 637 678 652 667 624 651 636 715 705 640 683 690 645 565 644 1313 25 7 2626 93 15 66 286 2669 97 756 855 602 590 625 632 559 628 710 625 667 683 618 680 686 638 633 657 669 665 650 655 ]
C [ 689 637 628 679 642 639 635 647 639 684 648 708 657 681 648 606 738 370 398 32 11 28 11 14 46 2396 5 909 928 533 688 746 667 627 659 671 632 690 667 678 675 628 650 699 714 680 723 678 630 718 ]
G [ 677 723 715 739 700 737 727 759 695 697 741 768 797 662 780 823 584 983 910 13 2606 18 668 2688 0 18 26 441 384 826 780 719 792 768 843 816 751 750 735 688 694 739 749 722 703 690 675 727 757 693 ]
T [ 694 679 657 662 697 689 688 687 732 700 613 536 623 691 599 643 830 720 96 2647 93 45 1945 0 2605 17 17 1270 649 503 647 662 633 690 656 602 624 652 648 668 730 670 632 658 667 690 650 647 680 651 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.02 0.03 -0.04 -0.00 -0.01 0.01 0.03 -0.02 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.01 -0.01 0.07 -0.00 -0.00 0.04 -0.03 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.02 0.04 -0.00 -0.01 0.06 -0.02 -0.01 0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.02 0.03 0.01 -0.01 -0.00 -0.04 0.04 -0.02 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 11448

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5533

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3784

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3525

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1491

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1308

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 653

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 471

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 25

CWM

PFM

     

HCWM

4 profiles found for the same TF (CREM) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001011.1 CREM ENCSR564TIP WTC11 Homo sapiens MA0609.3
BP001012.1 CREM ENCSR799FCZ HepG2 Homo sapiens MA0609.3
BP001013.1 CREM ENCSR839XZU GM12878 Homo sapiens MA0609.3
BP001014.1 CREM ENCSR903ELW HepG2 Homo sapiens MA0609.3
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