Detailed information of deep learning profile BP001012.1

This page shows detailed deep learning-derived predictions and motifs for CREM in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREM
Model ID: BP001012.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0609.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q03060  
Source: ENCSR799FCZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.00 0.01 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 0.02 0.00 0.01 0.00 0.01 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.06 -0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 216 217 223 224 225 197 209 234 240 215 216 213 223 212 160 145 159 115 134 173 176 169 193 155 333 382 481 33 26 1196 0 12 81 396 795 172 296 275 219 218 208 178 175 191 184 219 152 219 238 229 ]
C [ 466 440 454 432 439 470 456 448 442 425 439 463 395 446 557 340 330 769 319 733 441 586 364 374 390 178 153 53 23 13 1293 4 333 695 184 511 411 398 401 423 454 420 431 477 477 448 489 458 411 438 ]
G [ 396 417 393 448 439 418 442 404 401 463 446 413 479 463 405 672 640 311 717 301 509 377 594 590 209 522 627 34 1204 77 1 1299 53 119 190 364 391 479 525 466 464 518 511 454 467 442 466 433 451 421 ]
T [ 240 244 248 214 215 233 211 232 235 215 217 229 221 197 196 161 189 123 148 111 192 186 167 199 386 236 57 1198 65 32 24 3 851 108 149 271 220 166 173 211 192 202 201 196 190 209 211 208 218 230 ]

Hypothetical CWM

A [ -0.01 -0.02 -0.01 -0.01 -0.02 -0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 0.00 0.01 -0.02 -0.01 0.03 -0.03 -0.01 -0.01 0.01 0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.01 -0.00 -0.00 0.02 -0.00 0.02 0.01 0.01 0.00 0.00 0.00 -0.00 -0.01 0.01 -0.02 -0.02 0.06 -0.03 0.00 0.02 -0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.02 -0.00 0.01 0.00 0.01 0.01 -0.00 0.01 0.01 -0.02 0.03 -0.00 -0.04 0.05 -0.02 -0.01 0.00 -0.00 -0.00 0.00 ]
T [ -0.01 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 0.00 -0.01 -0.01 0.02 0.00 -0.01 -0.01 -0.03 0.02 -0.01 -0.01 0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 214

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 210

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 186

4 profiles found for the same TF (CREM) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001010.1 CREM ENCSR077DKV K562 Homo sapiens MA0609.3
BP001011.1 CREM ENCSR564TIP WTC11 Homo sapiens MA0609.3
BP001013.1 CREM ENCSR839XZU GM12878 Homo sapiens MA0609.3
BP001014.1 CREM ENCSR903ELW HepG2 Homo sapiens MA0609.3
Showing 4 profiles of page 1 from 1 pages
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