Detailed information of deep learning profile BP001011.1

This page shows detailed deep learning-derived predictions and motifs for CREM in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREM
Model ID: BP001011.1
Cell line/tissue: WTC11
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0609.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q03060  
Source: ENCSR564TIP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 -0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

A [ 365 370 421 424 364 364 378 386 373 384 383 389 358 344 297 257 276 211 264 255 309 344 343 294 298 418 785 155 99 1782 26 42 73 385 1595 192 401 434 367 336 348 309 314 312 318 363 310 316 366 409 ]
C [ 722 747 781 744 785 764 761 749 801 730 739 749 674 763 880 634 583 1277 495 1275 751 750 788 773 846 403 507 251 210 74 2144 39 340 1518 211 1138 731 694 843 797 770 727 811 715 842 780 806 817 755 772 ]
G [ 752 781 690 728 736 732 718 734 698 736 738 731 848 789 740 1105 1038 521 1257 492 860 805 752 800 514 971 757 174 1597 306 25 2148 73 218 297 478 684 789 756 793 778 860 787 875 766 774 781 768 759 707 ]
T [ 406 347 353 349 360 385 388 376 373 395 385 376 365 349 328 249 348 236 229 223 325 346 362 378 587 453 196 1665 339 83 50 16 1759 124 142 437 429 328 279 319 349 349 333 343 319 328 348 344 365 357 ]

Hypothetical CWM

A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.01 -0.00 0.03 -0.02 -0.01 -0.01 0.01 0.02 -0.01 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.01 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.01 -0.02 0.04 -0.02 0.00 0.01 -0.01 0.01 0.00 0.00 0.01 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.01 -0.00 0.01 0.00 0.00 0.01 -0.00 0.01 0.00 -0.01 0.02 0.00 -0.02 0.04 -0.02 -0.01 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.01 -0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 0.01 0.00 -0.01 0.02 0.01 -0.01 -0.01 -0.02 0.03 -0.01 -0.01 0.01 -0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 732

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 544

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 424

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 398

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 333

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 307

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 283

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 245

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 224

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 221

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 219

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 211

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 161

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 132

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 25

4 profiles found for the same TF (CREM) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001010.1 CREM ENCSR077DKV K562 Homo sapiens MA0609.3
BP001012.1 CREM ENCSR799FCZ HepG2 Homo sapiens MA0609.3
BP001013.1 CREM ENCSR839XZU GM12878 Homo sapiens MA0609.3
BP001014.1 CREM ENCSR903ELW HepG2 Homo sapiens MA0609.3
Showing 4 profiles of page 1 from 1 pages
  • 1 (current)