JASPAR - E2F4 - BP000953.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000953.1
Cell line/tissue:	HepG2
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR924LSO
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3929

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	-0.00	0.00	0.00	0.02	0.03	0.05	0.00	0.03	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.01	0.01	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	669	747	670	703	698	739	752	849	788	632	600	835	972	1267	898	328	166	84	10	2	14	6	36	928	651	523	625	643	632	665	653	598	710	841	775	679	652	719	666	703	697	729	679	715	694	688	703	711	680	698	]
C [	1397	1338	1355	1389	1373	1330	1302	1271	1332	1417	1585	1298	1237	1042	940	784	583	3418	3899	3921	2	3662	3434	1665	1575	1626	1298	1395	1488	1376	1259	1265	1228	1293	1357	1404	1325	1265	1376	1460	1356	1291	1326	1297	1315	1298	1263	1307	1258	1337	]
G [	1081	1084	1202	1094	1131	1166	1129	1105	898	895	876	1183	951	725	1081	894	262	154	18	5	3886	246	96	524	735	986	1114	1184	1098	1106	1277	1392	1268	1137	1160	1171	1242	1241	1223	1098	1173	1190	1167	1198	1192	1188	1223	1217	1241	1213	]
T [	782	760	702	743	727	694	746	704	911	985	868	613	769	895	1010	1923	2918	273	2	1	27	15	363	812	968	794	892	707	711	782	740	674	723	658	637	675	710	704	664	668	703	719	757	719	728	755	740	694	750	681	]

Hypothetical CWM

A [	0.01	-0.00	-0.01	-0.01	-0.03	-0.03	-0.03	-0.03	-0.03	0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	0.02	0.03	0.05	-0.01	0.03	0.01	0.01	0.00	0.00	0.00	]
G [	0.00	-0.00	0.00	0.00	0.02	-0.00	0.05	0.00	0.01	0.00	0.00	0.00	0.01	]
T [	-0.00	0.01	0.01	-0.01	-0.03	-0.04	-0.02	-0.03	-0.01	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2468

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 863

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 613

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 305

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 286

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 40

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 28

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3