Detailed information of deep learning profile BP000951.1

This page shows detailed deep learning-derived predictions and motifs for E2F4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F4
Model ID: BP000951.1
Cell line/tissue: WTC11
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA0470.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16254  
Source: ENCSR264OKN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.02 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 107 126 139 117 113 144 113 105 116 127 131 129 126 133 139 151 161 169 104 204 94 39 3 2 0 10 23 655 584 368 181 109 92 168 231 211 148 117 98 121 118 101 127 146 112 135 134 118 121 109 ]
C [ 227 224 211 222 209 210 226 233 256 200 189 255 206 192 235 182 199 199 212 121 135 217 16 700 0 170 60 20 21 108 164 190 240 172 149 172 178 203 225 232 205 226 217 185 230 191 226 225 244 220 ]
G [ 252 242 241 255 266 248 263 270 238 276 260 212 249 220 189 270 233 220 269 232 235 442 685 1 703 520 613 15 67 130 128 188 210 269 229 219 212 236 262 217 256 261 249 265 248 264 245 254 232 267 ]
T [ 118 112 113 110 116 102 102 96 94 101 124 108 123 159 141 101 111 116 119 147 240 6 0 1 1 4 8 14 32 98 231 217 162 95 95 102 166 148 119 134 125 116 111 108 114 114 99 107 107 108 ]

Hypothetical CWM

A [ -0.00 -0.01 -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 -0.02 -0.01 0.01 0.01 0.00 -0.00 -0.01 -0.01 ]
C [ -0.00 -0.00 -0.00 -0.00 0.01 -0.01 0.02 -0.01 0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 0.00 ]
G [ -0.00 0.00 -0.00 -0.00 0.00 0.02 -0.01 0.02 0.00 0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.01 -0.00 -0.00 -0.00 -0.02 -0.01 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 268

6 profiles found for the same TF (E2F4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000947.1 E2F4 ENCSR000DOR MCF 10A Homo sapiens MA0470.3
BP000948.1 E2F4 ENCSR000DYY GM12878 Homo sapiens MA0470.3
BP000949.1 E2F4 ENCSR000EVL HeLa-S3 Homo sapiens MA0470.3
BP000950.1 E2F4 ENCSR000EWL K562 Homo sapiens MA0470.3
BP000952.1 E2F4 ENCSR368GJN K562 Homo sapiens MA0470.3
BP000953.1 E2F4 ENCSR924LSO HepG2 Homo sapiens MA0470.3
Showing 6 profiles of page 1 from 1 pages
  • 1 (current)