JASPAR - E2F4 - BP000947.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000947.1
Cell line/tissue:	MCF 10A
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR000DOR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7175

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.04	0.06	0.10	0.00	0.08	0.03	0.01	0.01	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.10	0.00	0.01	0.00	0.00	0.00	]
T [	0.02	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	1507	1460	1373	1351	1441	1357	1348	1439	1398	1444	1355	1454	1391	1560	1345	1239	1163	1406	1654	1938	1413	753	408	241	10	1	4	2	51	1699	1581	848	1170	1220	1233	1298	1252	1320	1401	1508	1391	1403	1335	1399	1354	1392	1389	1384	1391	1490	]
C [	2310	2331	2343	2347	2350	2295	2364	2298	2324	2296	2449	2315	2326	2354	2487	2579	2698	2618	2321	1861	2028	1481	895	6441	7146	7162	1	6563	4934	2862	2361	2997	2396	2530	2453	2417	2351	2352	2344	2278	2324	2399	2323	2221	2280	2396	2296	2240	2242	2224	]
G [	1937	1927	1929	1918	1795	1963	1916	1875	1990	1905	1858	1926	1901	1796	1716	1683	1682	1797	1747	1569	1650	1149	529	371	15	6	7151	601	1372	948	1174	2269	1912	2024	1968	1846	2037	2081	2031	1904	1957	1905	1954	2040	2001	1898	1979	2018	1985	1946	]
T [	1421	1457	1530	1559	1589	1560	1547	1563	1463	1530	1513	1480	1557	1465	1627	1674	1632	1354	1453	1807	2084	3792	5343	122	4	6	19	9	818	1666	2059	1061	1697	1401	1521	1614	1535	1422	1399	1485	1503	1468	1563	1515	1540	1489	1511	1533	1557	1515	]

Hypothetical CWM

A [	0.01	0.01	0.00	-0.00	-0.00	-0.05	-0.05	-0.05	-0.06	-0.05	0.01	0.00	-0.01	-0.00	]
C [	-0.00	0.00	0.01	0.00	0.05	0.06	0.10	-0.01	0.08	0.04	0.02	0.01	0.02	0.01	]
G [	0.00	0.01	0.00	0.01	0.02	0.07	0.00	0.10	0.03	0.04	0.01	0.01	0.02	0.01	]
T [	0.00	0.01	0.02	0.03	-0.03	-0.06	-0.05	-0.02	-0.05	-0.00	-0.00	0.01	-0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2861

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1284

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 648

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 635

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 297

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 178

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 102

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 24

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3