JASPAR - E2F4 - BP000953.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000953.1
Cell line/tissue:	HepG2
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR924LSO
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3929

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.01	0.01	0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.03	0.00	0.05	0.03	0.02	0.00	0.00	-0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	681	750	694	740	755	728	719	757	719	703	668	664	704	710	675	637	658	723	674	740	782	711	707	892	794	968	812	363	15	27	1	2	273	2918	1923	1010	895	769	613	868	985	911	704	746	694	727	743	702	760	782	]
C [	1213	1241	1217	1223	1188	1192	1198	1167	1190	1173	1098	1223	1241	1242	1171	1160	1137	1268	1392	1277	1106	1098	1184	1114	986	735	524	96	246	3886	5	18	154	262	894	1081	725	951	1183	876	895	898	1105	1129	1166	1131	1094	1202	1084	1081	]
G [	1337	1258	1307	1263	1298	1315	1297	1326	1291	1356	1460	1376	1265	1325	1404	1357	1293	1228	1265	1259	1376	1488	1395	1298	1626	1575	1665	3434	3662	2	3921	3899	3418	583	784	940	1042	1237	1298	1585	1417	1332	1271	1302	1330	1373	1389	1355	1338	1397	]
T [	698	680	711	703	688	694	715	679	729	697	703	666	719	652	679	775	841	710	598	653	665	632	643	625	523	651	928	36	6	14	2	10	84	166	328	898	1267	972	835	600	632	788	849	752	739	698	703	670	747	669	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.01	-0.01	-0.03	-0.02	-0.04	-0.03	-0.01	0.01	0.01	-0.00	]
C [	0.01	0.00	0.00	0.00	0.01	0.00	0.05	-0.00	0.02	0.00	0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.01	0.03	-0.01	0.05	0.03	0.02	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	-0.03	-0.03	-0.03	-0.03	-0.03	-0.01	-0.01	-0.00	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2468

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 863

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 613

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 305

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 286

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 40

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 28

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3