JASPAR - E2F4 - BP000952.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000952.1
Cell line/tissue:	K562
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR368GJN
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 930

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.02	0.01	0.04	0.00	0.03	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.04	-0.00	0.00	0.00	-0.00	0.00	]
T [	-0.00	-0.00	0.00	0.01	0.01	0.02	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	158	146	167	144	166	167	179	210	191	155	127	158	188	219	222	97	31	13	23	3	0	2	0	7	304	179	126	127	142	152	181	166	145	160	150	175	139	141	172	167	151	155	147	157	189	149	146	160	149	147	]
C [	338	348	311	312	358	343	323	305	310	331	331	327	333	296	252	200	132	17	822	816	929	0	912	707	266	333	395	318	364	343	295	286	327	310	308	330	310	346	327	319	366	333	324	318	324	324	319	316	316	319	]
G [	273	255	272	292	240	251	268	262	251	251	205	229	279	251	196	153	24	9	67	106	1	927	15	144	166	139	242	276	261	244	260	283	285	302	293	258	310	267	281	274	264	266	292	269	262	281	297	275	313	286	]
T [	161	181	180	182	166	169	160	153	178	193	267	216	130	164	260	480	743	891	18	5	0	1	3	72	194	279	167	209	163	191	194	195	173	158	179	167	171	176	150	170	149	176	167	186	155	176	168	179	152	178	]

Hypothetical CWM

A [	0.00	0.01	-0.00	-0.00	-0.01	-0.01	-0.02	-0.03	-0.02	-0.02	-0.02	0.01	0.00	-0.00	-0.00	]
C [	0.00	-0.00	-0.00	-0.00	-0.01	0.02	0.01	0.04	-0.02	0.03	0.01	0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	-0.00	-0.01	-0.00	-0.00	0.02	-0.01	0.04	-0.01	0.01	-0.00	-0.01	0.00	0.00	]
T [	-0.00	0.00	0.01	0.01	0.02	-0.01	-0.02	-0.03	-0.03	-0.02	-0.01	-0.00	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 418

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 220

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 107

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 82

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 21

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3