JASPAR - E2F4 - BP000952.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000952.1
Cell line/tissue:	K562
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR368GJN
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 930

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.02	0.01	0.01	0.00	-0.00	-0.00	]
C [	0.00	-0.00	0.00	0.00	-0.00	0.04	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.03	0.00	0.04	0.01	0.02	0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	]

Frequency matrix

A [	178	152	179	168	176	155	186	167	176	149	170	150	176	171	167	179	158	173	195	194	191	163	209	167	279	194	72	3	1	0	5	18	891	743	480	260	164	130	216	267	193	178	153	160	169	166	182	180	181	161	]
C [	286	313	275	297	281	262	269	292	266	264	274	281	267	310	258	293	302	285	283	260	244	261	276	242	139	166	144	15	927	1	106	67	9	24	153	196	251	279	229	205	251	251	262	268	251	240	292	272	255	273	]
G [	319	316	316	319	324	324	318	324	333	366	319	327	346	310	330	308	310	327	286	295	343	364	318	395	333	266	707	912	0	929	816	822	17	132	200	252	296	333	327	331	331	310	305	323	343	358	312	311	348	338	]
T [	147	149	160	146	149	189	157	147	155	151	167	172	141	139	175	150	160	145	166	181	152	142	127	126	179	304	7	0	2	0	3	23	13	31	97	222	219	188	158	127	155	191	210	179	167	166	144	167	146	158	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.00	-0.01	-0.02	-0.03	-0.03	-0.02	-0.01	0.02	0.01	0.01	0.00	-0.00	]
C [	0.00	0.00	-0.01	-0.00	0.01	-0.01	0.04	-0.01	0.02	-0.00	-0.00	-0.01	-0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.01	0.03	-0.02	0.04	0.01	0.02	-0.01	-0.00	-0.00	-0.00	0.00	]
T [	-0.00	-0.00	0.00	0.01	-0.02	-0.02	-0.02	-0.03	-0.02	-0.01	-0.01	-0.00	-0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 418

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 220

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 107

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 82

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 21

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000950.1	E2F4	ENCSR000EWL	K562	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3