JASPAR - E2F4 - BP000950.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000950.1
Cell line/tissue:	K562
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR000EWL
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1889

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.02	0.01	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.02	0.05	0.00	0.06	0.03	0.03	0.00	0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	311	358	292	349	342	348	339	351	342	322	309	326	313	332	340	318	330	319	348	365	364	306	331	441	310	478	346	176	5	0	0	2	51	1707	1204	586	454	343	300	393	407	382	320	319	318	351	328	315	350	342	]
C [	584	557	604	568	554	596	537	563	587	570	557	577	631	561	586	555	556	637	626	562	533	570	612	547	500	344	323	5	35	1889	3	0	62	39	200	461	431	463	548	488	466	486	522	552	576	542	486	566	543	548	]
G [	670	644	682	649	662	639	672	659	663	681	713	689	644	723	681	694	665	649	671	682	659	736	701	614	831	697	719	1704	1848	0	1886	1882	1753	116	410	558	544	700	712	726	742	714	677	683	681	688	761	710	668	688	]
T [	324	330	311	323	331	306	341	316	297	316	310	297	301	273	282	322	338	284	244	280	333	277	245	287	248	370	501	4	1	0	0	5	23	27	75	284	460	383	329	282	274	307	370	335	314	308	314	298	328	311	]

Hypothetical CWM

A [	-0.00	-0.01	-0.00	-0.01	-0.01	-0.03	-0.04	-0.05	-0.05	-0.02	0.02	0.02	0.00	-0.00	]
C [	0.01	0.01	0.00	0.01	0.02	0.00	0.06	0.01	0.03	0.00	0.00	-0.00	0.01	0.00	]
G [	0.01	0.01	0.00	0.01	0.02	0.05	-0.01	0.06	0.03	0.03	-0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	-0.04	-0.04	-0.04	-0.04	-0.03	-0.02	-0.01	-0.01	-0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 913

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 271

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 249

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 211

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 53

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 38

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3