JASPAR - E2F4 - BP000950.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for E2F4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	E2F4
Model ID:	BP000950.1
Cell line/tissue:	K562
Class:	Fork head/winged helix factors
Family:	E2F
JASPAR ID:	MA0470.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q16254
Source:	ENCSR000EWL
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1889

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	0.00	0.00	0.03	0.03	0.06	0.00	0.05	0.02	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.01	0.02	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	311	328	298	314	308	314	335	370	307	274	282	329	383	460	284	75	27	23	5	0	0	1	4	501	370	248	287	245	277	333	280	244	284	338	322	282	273	301	297	310	316	297	316	341	306	331	323	311	330	324	]
C [	688	668	710	761	688	681	683	677	714	742	726	712	700	544	558	410	116	1753	1882	1886	0	1848	1704	719	697	831	614	701	736	659	682	671	649	665	694	681	723	644	689	713	681	663	659	672	639	662	649	682	644	670	]
G [	548	543	566	486	542	576	552	522	486	466	488	548	463	431	461	200	39	62	0	3	1889	35	5	323	344	500	547	612	570	533	562	626	637	556	555	586	561	631	577	557	570	587	563	537	596	554	568	604	557	584	]
T [	342	350	315	328	351	318	319	320	382	407	393	300	343	454	586	1204	1707	51	2	0	0	5	176	346	478	310	441	331	306	364	365	348	319	330	318	340	332	313	326	309	322	342	351	339	348	342	349	292	358	311	]

Hypothetical CWM

A [	0.00	-0.00	-0.01	-0.01	-0.02	-0.03	-0.04	-0.04	-0.04	-0.04	0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.01	0.03	0.03	0.06	-0.01	0.05	0.02	0.01	0.00	0.01	0.01	]
G [	0.00	0.01	-0.00	0.00	0.00	0.03	0.01	0.06	0.00	0.02	0.01	0.00	0.01	0.01	]
T [	-0.00	0.00	0.02	0.02	-0.02	-0.05	-0.05	-0.04	-0.03	-0.01	-0.01	-0.00	-0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 913

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 271

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 249

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 211

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 53

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 38

CWM

PFM

HCWM

6 profiles found for the same TF (E2F4) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000947.1	E2F4	ENCSR000DOR	MCF 10A	Homo sapiens	MA0470.3
BP000948.1	E2F4	ENCSR000DYY	GM12878	Homo sapiens	MA0470.3
BP000949.1	E2F4	ENCSR000EVL	HeLa-S3	Homo sapiens	MA0470.3
BP000951.1	E2F4	ENCSR264OKN	WTC11	Homo sapiens	MA0470.3
BP000952.1	E2F4	ENCSR368GJN	K562	Homo sapiens	MA0470.3
BP000953.1	E2F4	ENCSR924LSO	HepG2	Homo sapiens	MA0470.3