JASPAR - ZNF143 - BP000945.1

This page shows detailed deep learning-derived predictions and motifs for ZNF143 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF143
Model ID:	BP000945.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA0088.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P52747
Source:	ENCSR427WZJ
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2688

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.00	-0.00	0.00	0.00	0.00	-0.00	0.04	-0.00	0.01	0.03	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.00	0.00	-0.00	0.05	0.06	0.06	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.05	0.00	0.00	0.01	-0.00	0.03	-0.00	0.00	0.01	-0.00	0.00	]
G [	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.01	0.01	-0.00	0.00	0.00	0.02	0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.03	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.01	0.01	0.02	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.01	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	489	520	473	468	498	504	560	585	897	425	361	646	390	886	483	297	409	105	25	22	1973	195	1040	1808	195	148	44	741	232	198	198	88	327	375	327	517	499	404	452	463	476	488	477	420	464	483	527	523	467	474	]
C [	931	892	903	927	887	842	802	821	765	1220	905	918	1224	764	755	827	224	2463	2560	2553	52	423	1061	207	218	818	2540	1132	1294	1235	168	1873	183	1024	1178	855	898	920	873	890	863	814	786	906	935	880	878	839	854	855	]
G [	824	829	831	781	782	857	901	892	620	596	591	614	584	631	568	395	206	51	83	76	620	1605	500	543	818	1418	42	161	390	132	2026	539	1845	948	676	789	847	863	911	869	875	869	903	867	770	816	775	774	820	798	]
T [	444	447	481	512	521	485	425	390	406	447	831	510	490	407	882	1169	1849	69	20	37	43	465	87	130	1457	304	62	654	772	1123	296	188	333	341	507	527	444	501	452	466	474	517	522	495	519	509	508	552	547	561	]

Hypothetical CWM

A [	-0.00	0.01	0.01	0.00	0.02	0.01	-0.03	-0.04	0.05	-0.01	0.03	0.05	-0.01	-0.01	-0.01	0.02	-0.00	-0.02	-0.01	-0.03	-0.01	-0.00	-0.01	0.00	0.00	]
C [	0.02	0.00	0.01	0.01	-0.01	0.05	0.06	0.07	-0.03	0.00	0.01	-0.01	0.00	0.01	0.05	0.01	0.01	0.03	-0.01	0.04	-0.02	0.01	0.01	0.00	0.01	]
G [	0.00	0.01	-0.01	-0.00	-0.01	-0.03	0.02	0.01	0.04	0.02	0.01	0.01	0.01	0.03	-0.02	-0.01	-0.00	-0.02	0.04	-0.00	0.05	0.01	0.01	0.01	0.00	]
T [	-0.00	-0.00	0.02	0.02	0.03	-0.02	-0.04	-0.02	-0.04	0.02	-0.02	-0.01	0.04	-0.00	-0.01	0.01	0.02	0.03	-0.00	-0.01	-0.01	-0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2469

CWM

PFM

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000939.1	ZNF143	ENCSR000DZL	GM12878	Homo sapiens	MA0088.2
BP000940.1	ZNF143	ENCSR000EBW	H1	Homo sapiens	MA0088.2
BP000941.1	ZNF143	ENCSR000ECO	HeLa-S3	Homo sapiens	MA0088.2
BP000942.1	ZNF143	ENCSR000EGP	K562	Homo sapiens	MA0088.2
BP000943.1	ZNF143	ENCSR063FUV	WTC11	Homo sapiens	MA0088.2
BP000944.1	ZNF143	ENCSR080UEM	HepG2	Homo sapiens	MA0088.2
BP000946.1	ZNF143	ENCSR936XTK	GM12878	Homo sapiens	MA0088.2