Detailed information of deep learning profile BP000943.1

  1. Home
  2. Deep Learning Profile > BP000943.1
This page shows detailed deep learning-derived predictions and motifs for ZNF143 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF143
Model ID: BP000943.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0088.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52747  
Source: ENCSR063FUV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 0.03 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.03 -0.00 0.01 0.01 0.00 0.05 0.00 -0.00 -0.00 0.01 0.00 0.00 0.07 0.07 0.06 -0.00 0.00 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.03 0.01 -0.00 0.03 -0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 ]

Frequency matrix

       
A [ 525 490 550 486 469 502 508 497 530 428 512 457 434 454 516 494 299 336 197 281 1073 708 680 35 268 1558 93 65 437 23 13 8 53 1906 1191 877 431 438 463 830 415 397 352 436 495 467 482 452 423 446 ]
C [ 786 812 795 774 792 744 806 852 800 820 786 849 827 814 808 663 908 1736 565 1985 122 345 127 27 1417 735 520 453 1593 698 33 51 18 154 372 579 580 553 592 598 571 577 961 892 785 787 766 822 817 793 ]
G [ 847 856 830 848 892 912 885 821 812 930 884 875 931 897 805 1178 1027 217 1744 150 1247 1368 1133 2535 821 161 173 1117 423 22 2564 2554 2495 201 825 701 709 1267 918 889 1261 757 767 736 857 883 906 858 865 876 ]
T [ 469 469 452 519 474 469 428 457 485 449 445 446 435 462 498 292 393 338 121 211 185 206 687 30 121 173 1841 992 174 1884 17 14 61 366 239 470 907 369 654 310 380 896 547 563 490 490 473 495 522 512 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.00 0.02 0.01 0.01 -0.01 -0.01 0.03 -0.02 -0.02 0.02 -0.04 -0.03 -0.04 -0.01 0.03 0.02 0.02 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 0.04 0.00 0.04 -0.02 -0.00 -0.01 -0.01 0.03 0.01 0.02 0.01 0.02 0.05 -0.00 0.01 -0.03 -0.00 0.00 0.00 0.01 0.00 ]
G [ 0.01 0.00 0.01 0.01 -0.02 0.04 -0.01 0.03 0.01 0.01 0.05 0.01 -0.00 -0.01 0.01 0.01 -0.04 0.07 0.07 0.06 -0.01 0.00 0.01 0.00 0.02 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.01 -0.03 -0.01 -0.02 -0.00 0.01 -0.01 -0.01 -0.01 0.04 0.02 -0.01 0.04 -0.03 -0.04 0.00 0.02 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2886

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 210

CWM

PFM

     

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000939.1 ZNF143 ENCSR000DZL GM12878 Homo sapiens MA0088.2
BP000940.1 ZNF143 ENCSR000EBW H1 Homo sapiens MA0088.2
BP000941.1 ZNF143 ENCSR000ECO HeLa-S3 Homo sapiens MA0088.2
BP000942.1 ZNF143 ENCSR000EGP K562 Homo sapiens MA0088.2
BP000944.1 ZNF143 ENCSR080UEM HepG2 Homo sapiens MA0088.2
BP000945.1 ZNF143 ENCSR427WZJ K562 Homo sapiens MA0088.2
BP000946.1 ZNF143 ENCSR936XTK GM12878 Homo sapiens MA0088.2
Showing 7 profiles of page 1 from 1 pages
  • 1 (current)