JASPAR - ZNF143 - BP000941.1

This page shows detailed deep learning-derived predictions and motifs for ZNF143 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF143
Model ID:	BP000941.1
Cell line/tissue:	HeLa-S3
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA0088.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P52747
Source:	ENCSR000ECO
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_2

Number of seqlets: 1220

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	0.03	-0.00	0.01	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.00	0.00	-0.00	0.05	0.06	0.05	-0.00	0.00	0.01	-0.00	-0.00	0.00	0.05	0.00	0.00	0.01	-0.00	0.03	-0.00	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.01	0.01	0.00	0.00	0.00	0.01	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.03	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.00	0.02	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	0.00	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	209	236	201	194	222	211	240	255	412	172	133	285	171	367	203	135	132	13	2	4	863	67	450	831	79	66	5	340	77	76	38	32	85	168	131	201	197	183	181	213	199	190	196	191	200	211	240	200	219	191	]
C [	412	412	384	443	423	404	354	370	376	602	447	461	601	392	344	366	88	1181	1213	1205	4	211	535	78	56	304	1196	524	673	636	32	921	50	531	584	394	452	460	433	410	420	391	373	425	441	405	388	402	397	422	]
G [	381	384	418	368	371	405	439	444	281	261	277	287	253	288	291	205	53	4	5	6	345	761	207	278	333	725	9	45	180	29	1063	199	972	403	336	414	376	403	427	400	412	414	412	378	369	382	392	381	378	381	]
T [	218	188	217	215	204	200	187	151	151	185	363	187	195	173	382	514	947	22	0	5	8	181	28	33	752	125	10	311	290	479	87	68	113	118	169	211	195	174	179	197	189	225	239	226	210	222	200	237	226	226	]

Hypothetical CWM

A [	-0.00	0.01	0.00	0.00	0.02	0.01	-0.03	-0.02	0.04	-0.01	0.02	0.03	-0.01	-0.01	-0.01	0.02	-0.00	-0.01	-0.01	-0.02	-0.01	-0.00	-0.01	-0.00	-0.00	]
C [	0.02	0.01	0.01	0.01	-0.01	0.05	0.06	0.05	-0.03	0.01	0.02	-0.00	-0.00	0.01	0.05	0.01	0.01	0.02	-0.01	0.03	-0.01	0.01	0.01	0.00	0.01	]
G [	0.01	0.01	0.00	0.00	-0.00	-0.02	0.01	0.00	0.05	0.02	0.01	0.02	0.01	0.02	-0.01	-0.00	0.00	-0.01	0.04	0.00	0.03	0.01	0.01	0.01	0.01	]
T [	-0.00	-0.00	0.01	0.02	0.03	-0.01	-0.03	-0.02	-0.03	0.01	-0.01	-0.01	0.03	0.00	-0.01	0.00	0.02	0.02	-0.00	-0.01	-0.01	-0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3061

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1937

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 132

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 119

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 74

CWM

PFM

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000939.1	ZNF143	ENCSR000DZL	GM12878	Homo sapiens	MA0088.2
BP000940.1	ZNF143	ENCSR000EBW	H1	Homo sapiens	MA0088.2
BP000942.1	ZNF143	ENCSR000EGP	K562	Homo sapiens	MA0088.2
BP000943.1	ZNF143	ENCSR063FUV	WTC11	Homo sapiens	MA0088.2
BP000944.1	ZNF143	ENCSR080UEM	HepG2	Homo sapiens	MA0088.2
BP000945.1	ZNF143	ENCSR427WZJ	K562	Homo sapiens	MA0088.2
BP000946.1	ZNF143	ENCSR936XTK	GM12878	Homo sapiens	MA0088.2