Detailed information of deep learning profile BP000944.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF143 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF143
Model ID: BP000944.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0088.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52747  
Source: ENCSR080UEM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.04 -0.00 0.00 0.03 -0.00 0.02 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.05 -0.00 0.01 0.03 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.04 0.00 0.00 0.00 -0.00 0.10 0.12 0.12 -0.00 -0.00 0.01 -0.00 -0.00 0.01 0.07 0.01 0.01 0.01 -0.00 0.03 -0.00 0.00 0.01 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 0.02 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.04 0.00 0.03 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 0.01 0.01 0.04 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.01 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1368 1495 1486 1559 1451 1521 1377 1628 1678 1881 1948 3436 894 751 3042 891 3350 1708 635 789 127 12 26 5572 529 2371 4375 633 351 228 1485 682 806 744 513 1358 1153 950 1316 1559 1231 1280 1233 1278 1272 1265 1241 1212 1290 1573 ]
C [ 2354 2306 2318 2155 2305 2245 2188 2158 1971 1650 1573 1549 4007 1744 1767 4119 1579 1476 2096 431 6823 7044 7011 38 811 2948 803 547 2640 6573 3478 3256 2648 644 4120 774 2385 2971 2198 2131 2174 2202 2192 2223 2163 2156 2240 2485 2472 2199 ]
G [ 2023 1983 2021 2158 2126 2038 2002 2072 2085 2565 2624 1166 1250 1218 1211 1126 1227 1238 886 339 25 32 25 1436 4579 1484 1489 2254 3019 135 284 935 657 4811 1756 3871 2596 1753 2009 2199 2532 2402 2144 2275 2116 2350 2228 1993 1950 1974 ]
T [ 1360 1321 1280 1233 1223 1301 1538 1247 1371 1009 960 954 954 3392 1085 969 949 2683 3488 5546 130 17 43 59 1186 302 438 3671 1095 169 1858 2232 2994 906 716 1102 971 1431 1582 1216 1168 1221 1536 1329 1554 1334 1396 1415 1393 1359 ]

Hypothetical CWM

   
A [ -0.00 0.03 0.02 0.00 0.03 -0.01 -0.07 -0.05 0.07 -0.01 0.03 0.05 -0.00 -0.02 -0.01 0.01 -0.01 -0.02 -0.02 -0.03 -0.02 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.05 -0.00 0.01 0.01 -0.02 0.10 0.12 0.12 -0.05 -0.00 0.03 -0.01 -0.01 0.02 0.07 0.02 0.02 0.04 -0.01 0.05 -0.01 0.01 0.02 0.00 0.01 ]
G [ -0.01 0.02 -0.00 -0.00 -0.01 -0.06 -0.01 -0.02 0.08 0.03 0.01 0.03 0.02 0.03 -0.02 -0.01 0.00 -0.02 0.05 0.01 0.05 0.01 0.01 0.01 0.01 ]
T [ 0.00 -0.01 0.03 0.03 0.05 -0.02 -0.05 -0.04 -0.06 0.03 -0.02 -0.02 0.03 0.01 -0.03 0.00 0.02 0.02 -0.01 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 755

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 305

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 259

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 103

CWM

PFM

     

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000939.1 ZNF143 ENCSR000DZL GM12878 Homo sapiens MA0088.2
BP000940.1 ZNF143 ENCSR000EBW H1 Homo sapiens MA0088.2
BP000941.1 ZNF143 ENCSR000ECO HeLa-S3 Homo sapiens MA0088.2
BP000942.1 ZNF143 ENCSR000EGP K562 Homo sapiens MA0088.2
BP000943.1 ZNF143 ENCSR063FUV WTC11 Homo sapiens MA0088.2
BP000945.1 ZNF143 ENCSR427WZJ K562 Homo sapiens MA0088.2
BP000946.1 ZNF143 ENCSR936XTK GM12878 Homo sapiens MA0088.2
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