JASPAR - ZNF143 - BP000942.1

This page shows detailed deep learning-derived predictions and motifs for ZNF143 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF143
Model ID:	BP000942.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA0088.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P52747
Source:	ENCSR000EGP
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 1326

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.01	-0.00	0.00	-0.00	0.01	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.02	0.01	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	0.02	0.00	0.02	-0.00	-0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.00	-0.00	0.02	-0.00	0.01	0.01	0.00	0.04	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.05	0.05	0.05	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	0.01	-0.00	0.03	-0.00	-0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	325	287	299	267	274	308	263	264	312	262	276	234	294	250	348	323	193	251	110	184	635	437	388	11	209	821	69	34	280	13	5	2	24	961	649	526	238	313	294	351	291	242	274	259	308	312	262	292	267	278	]
C [	358	371	330	327	363	376	407	448	339	424	419	448	431	409	292	283	497	710	343	871	55	140	44	6	599	342	210	238	774	231	6	6	3	64	160	269	269	286	311	321	315	325	345	371	384	345	353	349	392	343	]
G [	358	405	427	433	405	390	362	359	352	395	358	369	386	383	421	548	420	104	819	110	489	662	589	1297	458	70	106	465	194	9	1312	1316	1271	68	383	335	393	483	436	445	457	391	398	383	365	379	432	401	369	411	]
T [	285	263	270	299	284	252	294	255	323	245	273	275	215	284	265	172	216	261	54	161	147	87	305	12	60	93	941	589	78	1073	3	2	28	233	134	196	426	244	285	209	263	368	309	313	269	290	279	284	298	294	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.01	-0.00	0.01	0.02	0.00	-0.01	0.00	0.02	-0.01	-0.01	0.02	-0.02	-0.02	-0.02	-0.01	0.02	0.02	0.01	0.00	0.00	-0.00	]
C [	0.01	0.01	0.01	0.01	0.03	0.01	0.03	-0.01	0.00	0.00	-0.01	0.03	0.02	0.02	0.01	0.02	0.04	0.01	0.01	-0.02	-0.00	0.00	0.01	0.01	0.01	0.01	]
G [	0.01	0.00	0.01	0.01	-0.00	0.03	-0.00	0.02	0.02	0.01	0.05	0.01	-0.00	0.00	0.02	0.00	-0.02	0.06	0.05	0.05	-0.00	0.01	0.01	0.01	0.01	0.01	]
T [	0.00	0.00	-0.01	-0.00	-0.01	-0.02	-0.00	-0.01	-0.01	0.01	-0.01	-0.00	-0.00	0.03	0.02	-0.00	0.03	-0.02	-0.03	0.01	0.01	-0.00	0.00	0.00	-0.00	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 18970

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1040

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1023

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 637

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 509

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 502

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 441

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 229

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 159

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 61

CWM

PFM

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000939.1	ZNF143	ENCSR000DZL	GM12878	Homo sapiens	MA0088.2
BP000940.1	ZNF143	ENCSR000EBW	H1	Homo sapiens	MA0088.2
BP000941.1	ZNF143	ENCSR000ECO	HeLa-S3	Homo sapiens	MA0088.2
BP000943.1	ZNF143	ENCSR063FUV	WTC11	Homo sapiens	MA0088.2
BP000944.1	ZNF143	ENCSR080UEM	HepG2	Homo sapiens	MA0088.2
BP000945.1	ZNF143	ENCSR427WZJ	K562	Homo sapiens	MA0088.2
BP000946.1	ZNF143	ENCSR936XTK	GM12878	Homo sapiens	MA0088.2