JASPAR - ZNF143 - BP000942.1

This page shows detailed deep learning-derived predictions and motifs for ZNF143 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF143
Model ID:	BP000942.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA0088.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P52747
Source:	ENCSR000EGP
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 1326

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	-0.00	0.03	-0.00	0.01	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.05	0.05	0.05	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.04	0.00	0.01	0.01	-0.00	0.02	-0.00	0.00	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.01	0.00	0.00	-0.00	-0.00	0.02	0.00	0.02	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.01	0.02	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	0.01	-0.00	0.00	-0.00	0.01	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	294	298	284	279	290	269	313	309	368	263	209	285	244	426	196	134	233	28	2	3	1073	78	589	941	93	60	12	305	87	147	161	54	261	216	172	265	284	215	275	273	245	323	255	294	252	284	299	270	263	285	]
C [	411	369	401	432	379	365	383	398	391	457	445	436	483	393	335	383	68	1271	1316	1312	9	194	465	106	70	458	1297	589	662	489	110	819	104	420	548	421	383	386	369	358	395	352	359	362	390	405	433	427	405	358	]
G [	343	392	349	353	345	384	371	345	325	315	321	311	286	269	269	160	64	3	6	6	231	774	238	210	342	599	6	44	140	55	871	343	710	497	283	292	409	431	448	419	424	339	448	407	376	363	327	330	371	358	]
T [	278	267	292	262	312	308	259	274	242	291	351	294	313	238	526	649	961	24	2	5	13	280	34	69	821	209	11	388	437	635	184	110	251	193	323	348	250	294	234	276	262	312	264	263	308	274	267	299	287	325	]

Hypothetical CWM

A [	0.01	-0.00	0.00	0.00	-0.00	0.01	0.01	-0.03	-0.02	0.03	-0.00	0.02	0.03	-0.00	-0.00	-0.01	0.01	-0.01	-0.01	-0.00	-0.02	-0.01	-0.00	-0.01	0.00	0.00	]
C [	0.01	0.01	0.01	0.01	0.01	-0.00	0.05	0.05	0.06	-0.02	0.00	0.02	0.00	-0.00	0.01	0.05	0.01	0.02	0.02	-0.00	0.03	-0.00	0.01	0.01	0.00	0.01	]
G [	0.01	0.01	0.01	0.01	0.00	-0.00	-0.02	0.01	0.01	0.04	0.02	0.01	0.02	0.02	0.03	-0.01	0.00	0.00	-0.01	0.03	0.01	0.03	0.01	0.01	0.01	0.01	]
T [	-0.00	0.00	0.00	0.01	0.02	0.02	-0.01	-0.02	-0.02	-0.02	0.02	-0.01	-0.01	0.02	0.00	-0.01	0.00	0.02	0.01	-0.00	-0.01	-0.00	-0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 18970

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1040

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1023

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 637

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 509

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 502

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 441

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 229

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 159

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 61

CWM

PFM

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000939.1	ZNF143	ENCSR000DZL	GM12878	Homo sapiens	MA0088.2
BP000940.1	ZNF143	ENCSR000EBW	H1	Homo sapiens	MA0088.2
BP000941.1	ZNF143	ENCSR000ECO	HeLa-S3	Homo sapiens	MA0088.2
BP000943.1	ZNF143	ENCSR063FUV	WTC11	Homo sapiens	MA0088.2
BP000944.1	ZNF143	ENCSR080UEM	HepG2	Homo sapiens	MA0088.2
BP000945.1	ZNF143	ENCSR427WZJ	K562	Homo sapiens	MA0088.2
BP000946.1	ZNF143	ENCSR936XTK	GM12878	Homo sapiens	MA0088.2