Detailed information of deep learning profile BP000940.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF143 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF143
Model ID: BP000940.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0088.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52747  
Source: ENCSR000EBW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 0.01 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 0.02 -0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 0.02 0.00 0.01 0.01 0.00 0.04 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.04 0.05 0.04 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 184 149 171 148 145 145 152 145 174 145 167 139 154 162 213 146 89 139 62 101 346 253 224 6 75 485 27 8 135 5 1 0 4 535 370 283 149 167 145 178 142 157 143 147 160 155 149 142 143 155 ]
C [ 188 224 182 184 205 210 192 235 188 209 227 200 205 182 161 142 288 402 181 497 20 63 21 1 386 158 98 138 455 111 2 2 3 32 66 119 128 149 182 213 166 182 204 199 185 206 199 200 210 220 ]
G [ 215 212 216 211 238 218 238 222 204 218 203 233 219 226 220 332 237 50 443 57 311 371 291 710 236 35 52 295 103 3 720 725 713 46 226 219 234 273 268 226 274 233 233 223 237 212 237 235 218 214 ]
T [ 140 142 158 184 139 154 145 125 161 155 130 155 149 157 133 107 113 136 41 72 50 40 191 10 30 49 550 286 34 608 4 0 7 114 65 106 216 138 132 110 145 155 147 158 145 154 142 150 156 138 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 0.01 0.01 0.00 -0.01 0.00 0.02 -0.01 -0.01 0.01 -0.02 -0.01 -0.02 -0.01 0.02 0.01 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.01 0.03 0.01 0.03 -0.01 0.00 0.00 0.00 0.02 0.01 0.02 0.01 0.02 0.03 -0.00 0.00 -0.01 -0.00 0.00 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.01 -0.00 0.03 0.00 0.02 0.01 0.01 0.04 0.01 0.00 0.00 0.01 0.01 -0.01 0.04 0.05 0.04 0.00 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.02 -0.01 -0.01 -0.00 0.01 -0.01 -0.01 -0.01 0.02 0.02 -0.01 0.02 -0.02 -0.02 0.00 0.01 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 21684

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 975

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 567

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 540

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 326

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 283

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_35

Num. of seqlets: 41

CWM

PFM

     

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000939.1 ZNF143 ENCSR000DZL GM12878 Homo sapiens MA0088.2
BP000941.1 ZNF143 ENCSR000ECO HeLa-S3 Homo sapiens MA0088.2
BP000942.1 ZNF143 ENCSR000EGP K562 Homo sapiens MA0088.2
BP000943.1 ZNF143 ENCSR063FUV WTC11 Homo sapiens MA0088.2
BP000944.1 ZNF143 ENCSR080UEM HepG2 Homo sapiens MA0088.2
BP000945.1 ZNF143 ENCSR427WZJ K562 Homo sapiens MA0088.2
BP000946.1 ZNF143 ENCSR936XTK GM12878 Homo sapiens MA0088.2
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