Detailed information of deep learning profile BP000940.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF143 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF143
Model ID: BP000940.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0088.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P52747  
Source: ENCSR000EBW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.04 0.05 0.04 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.04 0.00 0.01 0.01 0.00 0.02 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.01 0.00 0.00 0.00 -0.00 0.02 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.01 0.01 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 138 156 150 142 154 145 158 147 155 145 110 132 138 216 106 65 114 7 0 4 608 34 286 550 49 30 10 191 40 50 72 41 136 113 107 133 157 149 155 130 155 161 125 145 154 139 184 158 142 140 ]
C [ 214 218 235 237 212 237 223 233 233 274 226 268 273 234 219 226 46 713 725 720 3 103 295 52 35 236 710 291 371 311 57 443 50 237 332 220 226 219 233 203 218 204 222 238 218 238 211 216 212 215 ]
G [ 220 210 200 199 206 185 199 204 182 166 213 182 149 128 119 66 32 3 2 2 111 455 138 98 158 386 1 21 63 20 497 181 402 288 142 161 182 205 200 227 209 188 235 192 210 205 184 182 224 188 ]
T [ 155 143 142 149 155 160 147 143 157 142 178 145 167 149 283 370 535 4 0 1 5 135 8 27 485 75 6 224 253 346 101 62 139 89 146 213 162 154 139 167 145 174 145 152 145 145 148 171 149 184 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.01 0.00 -0.02 -0.02 0.02 -0.01 0.02 0.02 -0.01 -0.01 -0.01 0.01 -0.00 -0.01 -0.01 -0.02 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.00 0.04 0.05 0.04 -0.01 0.01 0.01 0.00 0.00 0.01 0.04 0.01 0.01 0.02 0.00 0.03 -0.00 0.01 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.00 -0.00 -0.01 0.00 -0.00 0.03 0.02 0.01 0.02 0.01 0.02 0.00 0.00 0.00 -0.01 0.03 0.01 0.03 0.01 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 0.01 0.02 -0.01 -0.02 -0.01 -0.02 0.01 -0.01 -0.01 0.02 0.00 -0.01 0.00 0.01 0.01 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 21684

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 975

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 567

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 540

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 326

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 283

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_35

Num. of seqlets: 41

CWM

PFM

     

HCWM

7 profiles found for the same TF (ZNF143) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000939.1 ZNF143 ENCSR000DZL GM12878 Homo sapiens MA0088.2
BP000941.1 ZNF143 ENCSR000ECO HeLa-S3 Homo sapiens MA0088.2
BP000942.1 ZNF143 ENCSR000EGP K562 Homo sapiens MA0088.2
BP000943.1 ZNF143 ENCSR063FUV WTC11 Homo sapiens MA0088.2
BP000944.1 ZNF143 ENCSR080UEM HepG2 Homo sapiens MA0088.2
BP000945.1 ZNF143 ENCSR427WZJ K562 Homo sapiens MA0088.2
BP000946.1 ZNF143 ENCSR936XTK GM12878 Homo sapiens MA0088.2
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