Detailed information of deep learning profile BP000893.1

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This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TCF7L2
Model ID: BP000893.1
Cell line/tissue: HepG2
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
JASPAR ID: MA0523.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQB0  
Source: ENCSR346BOD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.01 -0.00 0.02 0.00 -0.00 0.07 0.05 0.05 0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.05 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2278 2335 2345 2269 2298 2433 2336 2225 2248 2164 2440 2363 2298 2354 1989 2068 2034 2857 3169 5698 209 5189 687 368 8550 8300 8255 781 2156 2390 2769 2553 2018 1877 1891 1984 2034 2202 2135 2290 2227 2180 2182 2392 2197 2168 2252 2213 2255 2151 ]
C [ 2036 1980 1886 2075 2039 1978 1893 2163 2140 2066 1922 1981 1933 2086 2244 2235 2469 1781 1723 381 3223 136 55 7092 3 59 13 496 1619 2341 2237 2223 2479 2023 2192 2280 2034 2027 2176 2029 1953 2176 2123 1989 2058 2085 2110 2093 1986 2104 ]
G [ 2042 2109 2253 2171 2073 2080 2223 2129 2071 2110 2142 2205 2285 2226 2398 2424 2255 2160 2671 1447 4720 170 18 936 5 199 106 7209 3951 2650 1700 1838 2174 2662 2452 2166 2447 2308 2139 2152 2246 2130 2189 2063 2288 2277 2110 2089 2241 2218 ]
T [ 2217 2149 2089 2058 2163 2082 2121 2056 2114 2233 2069 2024 2057 1907 1942 1846 1815 1775 1010 1047 421 3078 7813 177 15 15 199 87 847 1192 1867 1959 1902 2011 2038 2143 2058 2036 2123 2102 2147 2087 2079 2129 2030 2043 2101 2178 2091 2100 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.02 -0.02 0.03 0.00 -0.01 0.07 0.05 0.05 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.00 -0.01 0.02 -0.02 -0.01 0.05 -0.04 -0.02 -0.04 0.01 0.01 0.01 0.02 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.04 -0.01 -0.04 -0.01 -0.02 -0.00 -0.01 0.04 0.02 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.01 0.02 0.05 -0.01 -0.02 -0.03 -0.00 -0.03 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6799

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5548

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 5051

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 3049

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 2033

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1697

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1390

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 1369

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 824

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 268

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 247

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 24

CWM

PFM

     

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000886.1 TCF7L2 ENCSR000EUV HCT116 Homo sapiens MA0523.2
BP000887.1 TCF7L2 ENCSR000EUY HEK293 Homo sapiens MA0523.2
BP000888.1 TCF7L2 ENCSR000EVE HeLa-S3 Homo sapiens MA0523.2
BP000889.1 TCF7L2 ENCSR000EVF HeLa-S3 Homo sapiens MA0523.2
BP000890.1 TCF7L2 ENCSR000EVQ HepG2 Homo sapiens MA0523.2
BP000891.1 TCF7L2 ENCSR000EWT MCF-7 Homo sapiens MA0523.2
BP000892.1 TCF7L2 ENCSR000EXL Panc1 Homo sapiens MA0523.2
Showing 7 profiles of page 1 from 1 pages
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