JASPAR - TCF7L2 - BP000891.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000891.1
Cell line/tissue:	MCF-7
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EWT
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3820

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	0.00	0.02	-0.00	0.04	0.00	-0.00	0.07	0.06	0.06	-0.00	0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.01	-0.00	0.00	-0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.04	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.01	0.07	-0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	1075	1063	1048	1016	1059	1080	1048	1054	1035	1050	948	978	1059	1069	1029	1066	1035	930	954	916	1207	1449	2647	59	2590	145	168	3780	3686	3752	300	946	1186	1425	1109	929	947	846	938	1003	1059	1013	971	1039	1021	1002	1021	1001	1039	1054	]
C [	922	860	852	928	939	882	913	884	928	879	988	1012	924	852	924	790	884	1023	889	1005	871	789	162	1701	37	16	3126	5	23	3	236	745	1056	824	914	1050	950	971	1001	954	917	867	890	864	952	946	912	895	887	890	]
G [	920	939	1002	905	880	914	915	901	909	949	880	901	897	963	999	958	1052	1043	1166	1126	898	1083	538	1910	1	2	466	1	103	59	3226	1820	1097	736	826	945	1043	1144	952	971	932	981	992	1009	930	952	902	941	954	938	]
T [	903	958	918	971	942	944	944	981	948	942	1004	929	940	936	868	1006	849	824	811	773	844	499	473	150	1192	3657	60	34	8	6	58	309	481	835	971	896	880	859	929	892	912	959	967	908	917	920	985	983	940	938	]

Hypothetical CWM

A [	-0.00	0.00	0.01	0.03	-0.03	0.05	0.00	-0.00	0.07	0.06	0.06	-0.00	0.01	0.01	0.01	-0.00	-0.01	]
C [	0.01	0.01	0.01	-0.01	0.03	-0.04	-0.02	0.05	-0.04	-0.02	-0.03	0.01	0.01	0.01	0.01	0.01	0.02	]
G [	0.02	0.00	0.01	-0.00	0.04	-0.04	-0.06	0.01	-0.03	0.00	-0.00	0.04	0.02	0.02	0.01	0.01	0.01	]
T [	-0.00	0.01	0.00	0.00	-0.01	0.02	0.08	-0.02	0.00	-0.03	-0.03	-0.03	-0.01	-0.00	0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 949

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 826

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 550

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 491

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 247

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 244

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 208

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 167

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 72

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2