JASPAR - TCF7L2 - BP000889.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000889.1
Cell line/tissue:	HeLa-S3
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVF
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2556

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.02	-0.00	0.03	0.00	-0.00	0.07	0.06	0.05	-0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	-0.00	-0.00	0.04	0.01	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	0.01	0.07	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	726	721	762	677	712	709	686	646	698	691	681	661	623	607	656	597	765	954	1658	75	1549	124	89	2535	2486	2473	186	537	799	915	691	538	570	599	655	659	642	646	661	648	662	645	649	665	686	690	657	686	695	660	]
C [	632	616	555	622	635	583	631	657	577	614	643	533	641	728	600	674	613	513	170	1180	46	16	2066	3	15	4	120	529	721	569	622	737	656	672	722	662	666	602	609	605	601	601	586	622	616	612	614	627	640	648	]
G [	600	678	631	659	610	666	660	622	685	653	632	711	763	673	755	783	636	754	405	1140	23	2	357	1	41	58	2227	1246	748	510	600	695	776	744	683	671	680	659	671	654	680	677	644	685	651	647	647	644	635	623	]
T [	598	541	608	598	599	598	579	631	596	598	600	651	529	548	545	502	542	335	323	161	938	2414	44	17	14	21	23	244	288	562	643	586	554	541	496	564	568	649	615	649	613	633	677	584	603	607	638	599	586	625	]

Hypothetical CWM

A [	-0.01	-0.00	0.01	0.02	-0.03	0.04	0.00	-0.02	0.07	0.06	0.05	-0.01	-0.00	0.00	0.00	-0.00	-0.01	]
C [	0.01	0.01	0.00	-0.01	0.03	-0.04	-0.03	0.05	-0.04	-0.03	-0.03	0.01	0.01	0.01	0.00	0.01	0.01	]
G [	0.02	0.00	0.00	0.00	0.02	-0.03	-0.06	0.01	-0.04	-0.02	-0.01	0.04	0.02	0.01	0.00	0.00	0.01	]
T [	-0.01	0.00	-0.00	-0.01	-0.01	0.03	0.07	-0.03	-0.01	-0.02	-0.01	-0.03	-0.02	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1036

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2