JASPAR - TCF7L2 - BP000888.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000888.1
Cell line/tissue:	HeLa-S3
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVE
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5371

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.02	-0.00	0.04	0.00	0.00	0.08	0.06	0.06	-0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	-0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.04	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	0.01	0.08	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	1375	1450	1356	1397	1410	1395	1458	1420	1360	1416	1367	1347	1415	1359	1317	1385	1265	1243	1280	1268	1615	2037	3710	123	3408	188	358	5337	5143	5196	444	1179	1668	1908	1488	1210	1249	1123	1282	1379	1381	1311	1337	1375	1282	1308	1379	1336	1406	1387	]
C [	1406	1238	1365	1306	1356	1337	1280	1360	1409	1306	1369	1424	1294	1363	1349	1145	1273	1475	1344	1413	1280	1083	279	2344	84	18	4343	8	31	10	272	1075	1487	1314	1256	1515	1375	1428	1496	1400	1306	1320	1332	1286	1412	1334	1300	1327	1318	1309	]
G [	1297	1327	1358	1409	1311	1417	1389	1337	1296	1350	1391	1376	1375	1388	1410	1524	1688	1531	1592	1622	1403	1635	788	2596	26	1	599	1	190	125	4591	2663	1661	994	1213	1429	1552	1612	1438	1432	1452	1445	1438	1460	1417	1454	1358	1427	1378	1385	]
T [	1293	1356	1292	1259	1294	1222	1244	1254	1306	1299	1244	1224	1287	1261	1295	1317	1145	1122	1155	1068	1073	616	594	308	1853	5164	71	25	7	40	64	454	555	1155	1414	1217	1195	1208	1155	1160	1232	1295	1264	1250	1260	1275	1334	1281	1269	1290	]

Hypothetical CWM

A [	-0.01	0.00	0.01	0.03	-0.03	0.05	0.01	-0.00	0.08	0.07	0.06	0.00	0.00	0.00	0.01	-0.00	-0.01	]
C [	0.01	0.01	0.01	-0.01	0.03	-0.04	-0.03	0.05	-0.03	-0.02	-0.03	0.01	0.01	0.01	0.01	0.01	0.01	]
G [	0.01	0.00	0.01	0.00	0.03	-0.03	-0.06	-0.00	-0.04	-0.00	-0.00	0.04	0.03	0.02	0.00	0.00	0.01	]
T [	0.00	0.00	-0.00	0.00	-0.00	0.02	0.08	-0.02	-0.01	-0.03	-0.01	-0.03	-0.02	-0.01	-0.00	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4434

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1886

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1228

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 381

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 221

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 143

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 94

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 36

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2