JASPAR - TCF7L2 - BP000886.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000886.1
Cell line/tissue:	HCT116
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EUV
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8151

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.09	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.02	0.06	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	0.00	0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.06	-0.00	-0.00	0.02	-0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	0.07	0.08	0.09	-0.00	0.00	0.04	-0.00	0.02	0.00	0.00	-0.00	]

Frequency matrix

A [	1851	1847	1903	1832	1817	1830	1919	1922	1910	1833	1872	1822	1866	1824	1716	1735	1763	1855	1941	1641	825	729	75	91	8	51	191	7374	2803	463	901	979	1593	1533	1682	1685	1701	2006	1910	1904	1881	1840	1876	1917	1848	1858	1840	1813	1868	1917	]
C [	2194	2257	2226	2290	2226	2214	2153	2321	2148	2261	2256	2261	2336	2251	2231	2410	2470	2248	1904	1743	2551	4064	6902	308	284	0	933	7	21	3775	1350	2502	2171	2482	2446	2297	2506	2283	2228	2211	2129	2214	2207	2081	2105	2047	2171	2221	2135	2136	]
G [	2070	2076	2080	1996	2045	2050	2029	1970	2138	2064	2030	2109	2012	2094	2290	2193	2144	2310	2103	2007	2406	1554	441	6	135	5	6686	61	124	3707	496	1748	2020	2185	2058	2226	2048	1756	2018	2022	2067	2040	2040	2011	2089	2099	2010	2036	2038	2003	]
T [	2036	1971	1942	2033	2063	2057	2050	1938	1955	1993	1993	1959	1937	1982	1914	1813	1774	1738	2203	2760	2369	1804	733	7746	7724	8095	341	709	5203	206	5404	2922	2367	1951	1965	1943	1896	2106	1995	2014	2074	2057	2028	2142	2109	2147	2130	2081	2110	2095	]

Hypothetical CWM

A [	-0.01	0.00	-0.00	-0.01	-0.02	-0.06	-0.01	-0.05	-0.01	-0.03	0.09	0.04	-0.02	-0.01	-0.00	0.00	-0.01	]
C [	0.02	0.01	0.01	0.02	0.04	0.06	-0.00	-0.01	-0.04	0.00	-0.08	-0.07	0.04	0.01	0.01	0.01	0.02	]
G [	0.02	0.02	0.02	0.02	0.02	0.02	-0.08	-0.03	-0.05	0.07	-0.03	-0.04	0.05	-0.01	0.01	0.01	0.02	]
T [	-0.01	-0.01	0.00	0.01	-0.00	-0.01	0.08	0.08	0.09	-0.02	0.01	0.07	-0.04	0.03	0.01	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5990

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 711

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 379

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 91

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2