Detailed information of deep learning profile BP000823.1

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This page shows detailed deep learning-derived predictions and motifs for ESRRA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESRRA
Model ID: BP000823.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0592.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P11474  
Source: ENCSR486IFJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.07 0.05 -0.00 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.04 0.00 0.00 0.00 -0.00 0.05 0.03 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3207 3129 2948 3445 3314 3324 3477 3208 2908 3138 3825 3055 2964 4004 2902 2323 3175 3928 2856 3108 120 938 12855 7 130 24 206 1071 5483 3520 3154 4616 3874 3095 2607 2660 3525 3205 3056 2742 3459 3650 2702 2669 2933 2979 3653 2747 2969 3185 ]
C [ 3600 4019 3952 3851 4525 4754 3823 4249 3510 3428 3295 4687 4223 3733 3683 5267 3745 3702 3287 2429 752 681 582 14343 14097 386 3306 2657 2293 3253 4631 3115 2928 4066 5019 4719 4316 4777 3429 3682 3588 3664 5087 4877 3899 4746 3560 4224 4186 3441 ]
G [ 3540 3197 3570 3615 3140 2909 3349 3081 3416 3925 4129 2854 3374 3365 4012 3002 2910 4078 3237 5721 38 12726 24 1 20 29 161 7438 4840 4995 3578 3009 4383 3957 2597 2788 2813 2754 3403 3183 3048 3354 2893 2941 2828 2928 2993 3151 3158 3797 ]
T [ 4007 4009 3884 3443 3375 3367 3705 3816 4520 3863 3105 3758 3793 3252 3757 3762 4524 2646 4974 3096 13444 9 893 3 107 13915 10681 3188 1738 2586 2991 3614 3169 3236 4131 4187 3700 3618 4466 4747 4259 3686 3672 3867 4694 3701 4148 4232 4041 3931 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 0.00 -0.02 0.00 0.04 -0.03 -0.01 -0.04 -0.01 -0.01 0.02 0.00 0.00 ]
C [ 0.00 0.01 0.00 -0.00 0.01 -0.00 -0.00 0.07 0.05 -0.00 0.02 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.03 0.04 -0.04 -0.02 -0.01 -0.01 -0.03 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 0.04 -0.05 -0.00 -0.03 -0.02 0.05 0.03 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4438

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2457

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1609

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 112

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000818.1 ESRRA ENCSR000DYQ GM12878 Homo sapiens MA0592.4
BP000819.1 ESRRA ENCSR000EEW HepG2 Homo sapiens MA0592.4
BP000820.1 ESRRA ENCSR029OPK WTC11 Homo sapiens MA0592.4
BP000821.1 ESRRA ENCSR267NVP HepG2 Homo sapiens MA0592.4
BP000822.1 ESRRA ENCSR473SUA A549 Homo sapiens MA0592.4
BP000824.1 ESRRA ENCSR954WVZ MCF-7 Homo sapiens MA0592.4
Showing 6 profiles of page 1 from 1 pages
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