JASPAR - ESRRA - BP000821.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESRRA
Model ID:	BP000821.1
Cell line/tissue:	HepG2
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0592.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P11474
Source:	ENCSR267NVP
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7586

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.02	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.04	0.04	-0.00	0.00	0.00	-0.00	0.00	0.01	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.03	-0.00	-0.00	0.00	0.00	-0.00	0.01	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	0.00	0.02	-0.00	-0.00	-0.00	0.00	0.04	0.03	0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	1563	1566	1608	1663	1658	1626	1760	1586	1660	1668	1851	1692	1524	1620	1756	1501	1856	1683	1512	1486	182	455	5944	40	17	11	104	269	2512	1907	1729	1711	1529	1467	1490	1596	1778	1561	1503	1665	1885	1846	1653	1605	1629	1634	1668	1637	1602	1684	]
C [	2127	2193	2066	2079	2243	2297	2133	2240	2118	2080	1953	2188	2210	2153	1837	2625	2069	2622	1745	1916	563	179	727	7532	7521	340	942	1018	758	2282	3349	2864	2430	1973	1841	2051	2071	2332	2267	2015	2131	2081	2239	2171	2079	2161	1999	2183	2120	2090	]
G [	1913	1905	1887	2014	1786	1815	1810	1822	1747	1846	1958	1691	1783	1989	2087	1887	1775	1930	1766	2579	185	6931	385	4	7	4	96	3864	3556	2288	1215	1039	1549	2097	2096	2190	2039	1804	1698	1853	1800	1891	1813	1893	1810	1862	1907	1845	1892	2014	]
T [	1983	1922	2025	1830	1899	1848	1883	1938	2061	1992	1824	2015	2069	1824	1906	1573	1886	1351	2563	1605	6656	21	530	10	41	7231	6444	2435	760	1109	1293	1972	2078	2049	2159	1749	1698	1889	2118	2053	1770	1768	1881	1917	2068	1929	2012	1921	1972	1798	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.00	-0.02	0.00	0.03	0.00	-0.02	-0.03	-0.02	-0.01	0.01	0.00	-0.00	-0.01	-0.01	]
C [	0.00	0.01	0.00	0.00	0.01	-0.01	0.00	0.04	0.04	0.00	0.01	0.01	-0.00	0.01	0.01	0.01	0.01	]
G [	0.00	0.01	0.01	0.01	-0.01	0.04	-0.01	-0.02	-0.01	-0.01	-0.02	0.02	0.01	0.00	-0.00	-0.00	0.01	]
T [	-0.00	-0.01	0.00	0.00	0.03	-0.03	-0.01	-0.02	-0.01	0.04	0.03	0.00	-0.01	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3843

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 412

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 374

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 270

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 101

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 42

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 41

CWM

PFM

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000818.1	ESRRA	ENCSR000DYQ	GM12878	Homo sapiens	MA0592.4
BP000819.1	ESRRA	ENCSR000EEW	HepG2	Homo sapiens	MA0592.4
BP000820.1	ESRRA	ENCSR029OPK	WTC11	Homo sapiens	MA0592.4
BP000822.1	ESRRA	ENCSR473SUA	A549	Homo sapiens	MA0592.4
BP000823.1	ESRRA	ENCSR486IFJ	K562	Homo sapiens	MA0592.4
BP000824.1	ESRRA	ENCSR954WVZ	MCF-7	Homo sapiens	MA0592.4