Detailed information of deep learning profile BP000819.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESRRA
Model ID: BP000819.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0592.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P11474  
Source: ENCSR000EEW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 -0.00 0.00 0.02 0.03 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.03 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.02 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

A [ 241 218 243 241 221 240 222 245 295 205 208 207 253 227 217 265 196 123 91 279 842 948 16 5 41 1 902 168 316 138 254 165 202 204 243 254 210 224 240 219 239 236 229 201 239 242 223 245 222 228 ]
C [ 241 247 280 257 230 254 252 280 216 249 261 286 271 285 267 168 164 399 524 574 13 4 4 3 18 954 21 445 279 293 213 273 314 285 266 227 277 295 253 244 245 242 260 272 277 275 281 253 287 266 ]
G [ 314 336 294 316 347 296 317 294 317 355 303 318 298 298 314 339 415 286 104 112 125 42 965 947 97 16 60 220 201 351 288 387 275 310 316 314 279 296 267 325 316 318 315 312 291 292 298 294 297 292 ]
T [ 201 196 180 183 199 207 206 178 169 188 225 186 175 187 199 225 222 189 278 32 17 3 12 42 841 26 14 164 201 215 242 172 206 198 172 202 231 182 237 209 197 201 193 212 190 188 195 205 191 211 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.01 -0.01 0.00 0.02 0.03 -0.02 -0.02 -0.01 -0.02 0.02 0.00 -0.00 -0.01 -0.01 ]
C [ -0.00 -0.01 0.00 0.01 0.01 -0.02 -0.01 -0.01 -0.02 -0.02 0.03 -0.01 0.00 0.00 0.00 -0.00 ]
G [ 0.01 0.01 0.00 -0.00 -0.01 -0.00 -0.01 0.02 0.03 -0.00 -0.02 0.00 -0.01 -0.00 0.00 0.00 ]
T [ -0.01 -0.00 -0.00 0.00 -0.01 -0.01 -0.02 -0.02 -0.00 0.02 -0.00 -0.02 -0.01 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 376

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 23

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000818.1 ESRRA ENCSR000DYQ GM12878 Homo sapiens MA0592.4
BP000820.1 ESRRA ENCSR029OPK WTC11 Homo sapiens MA0592.4
BP000821.1 ESRRA ENCSR267NVP HepG2 Homo sapiens MA0592.4
BP000822.1 ESRRA ENCSR473SUA A549 Homo sapiens MA0592.4
BP000823.1 ESRRA ENCSR486IFJ K562 Homo sapiens MA0592.4
BP000824.1 ESRRA ENCSR954WVZ MCF-7 Homo sapiens MA0592.4
Showing 6 profiles of page 1 from 1 pages
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