Detailed information of deep learning profile BP000779.1

  1. Home
  2. Deep Learning Profile > BP000779.1
This page shows detailed deep learning-derived predictions and motifs for TEAD4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000779.1
Cell line/tissue: WTC11
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR285HHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.05 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.01 0.00 -0.00 -0.00 0.03 0.04 -0.00 0.00 0.00 0.03 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.01 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 305 287 263 292 294 311 318 311 303 287 256 279 271 294 247 266 307 289 274 360 366 271 77 118 157 606 75 12 1306 1371 0 0 3 315 414 342 257 345 338 255 282 317 336 299 300 323 316 306 289 327 ]
C [ 420 380 395 390 395 384 395 375 383 357 397 429 393 480 496 518 459 481 372 314 404 336 468 567 843 53 2 4 12 0 2 34 601 318 248 348 389 357 352 365 389 394 310 345 364 358 345 370 387 367 ]
G [ 344 389 407 393 383 370 362 383 362 387 398 345 408 319 345 304 249 367 393 334 378 321 613 460 149 47 1294 1355 1 0 0 1075 3 563 541 381 447 386 404 336 377 333 414 452 423 396 433 405 421 399 ]
T [ 302 315 306 296 299 306 296 302 323 340 320 318 299 278 283 283 356 234 332 363 223 443 213 226 222 665 0 0 52 0 1369 262 764 175 168 300 278 283 277 415 323 327 311 275 284 294 277 290 274 278 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.01 -0.01 -0.01 -0.00 0.01 0.00 -0.01 0.03 0.05 -0.03 -0.03 -0.02 -0.00 0.00 -0.00 -0.01 ]
C [ 0.00 0.00 0.00 0.01 0.01 0.01 0.01 -0.00 -0.01 -0.01 -0.01 -0.02 0.01 -0.01 0.03 0.00 0.00 0.00 0.00 ]
G [ 0.01 -0.00 0.00 0.00 0.01 0.01 -0.00 -0.01 0.03 0.04 -0.03 -0.02 -0.04 0.03 -0.03 0.01 0.01 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 0.00 -0.00 -0.01 -0.00 0.01 -0.03 -0.03 0.00 -0.02 0.05 0.01 0.02 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 560

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
Showing 10 profiles of page 1 from 1 pages
  • 1 (current)