Detailed information of deep learning profile BP000777.1

  1. Home
  2. Deep Learning Profile > BP000777.1
This page shows detailed deep learning-derived predictions and motifs for TEAD4 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000777.1
Cell line/tissue: SK-N-SH
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BUQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.01 0.01 0.04 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.03 0.03 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.05 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 991 1009 1020 994 1025 1071 1071 996 1064 979 1060 1022 1114 909 831 2128 1241 3766 1 183 15 5 2045 837 1140 746 1091 811 1496 523 468 2116 864 781 850 1509 1260 901 957 983 963 963 1034 992 1003 1059 1039 1055 985 1054 ]
C [ 855 846 890 871 884 850 841 891 968 898 889 963 945 1174 982 19 2317 0 0 2 3688 3720 116 450 648 1028 795 868 834 555 457 380 1009 721 1198 954 735 1025 1019 895 906 888 821 868 885 836 851 820 884 849 ]
G [ 873 856 866 884 872 806 830 846 871 783 792 909 779 695 853 1523 211 4 0 180 35 5 52 1712 1064 1479 1069 1194 812 412 1688 580 1248 813 619 666 784 741 763 848 872 867 874 856 884 848 875 814 850 831 ]
T [ 1051 1059 994 1021 989 1043 1028 1037 867 1110 1029 876 932 992 1104 100 1 0 3769 3405 32 40 1557 771 918 517 815 897 628 2280 1157 694 649 1455 1103 641 991 1103 1031 1044 1029 1052 1041 1054 998 1027 1005 1081 1051 1036 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.02 0.02 0.04 -0.02 0.00 -0.01 -0.02 0.01 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.02 0.02 -0.03 -0.02 -0.03 0.03 0.03 -0.01 0.00 0.00 0.01 ]
G [ 0.00 0.00 0.00 0.01 0.02 0.00 -0.00 -0.03 0.01 -0.01 -0.01 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 -0.04 -0.03 0.05 0.02 -0.00 0.01 0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7440

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 824

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 732

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 588

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 317

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 74

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
Showing 10 profiles of page 1 from 1 pages
  • 1 (current)