Detailed information of deep learning profile BP000771.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000771.1
Cell line/tissue: K562
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BRK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.01 0.00 -0.00 0.02 0.02 0.00 0.00 0.00 0.02 0.00 0.01 0.01 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.03 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 225 219 181 188 196 191 199 195 165 208 185 152 133 137 168 156 136 168 199 161 136 219 61 81 98 356 26 7 763 785 1 0 7 281 173 191 174 218 165 167 151 232 222 184 152 231 135 248 191 177 ]
C [ 224 194 154 174 160 186 234 182 226 198 246 199 256 248 237 245 291 346 258 247 334 164 174 198 490 44 4 11 15 0 1 11 353 58 116 165 182 109 209 150 259 178 158 152 296 167 243 161 209 239 ]
G [ 170 194 248 271 261 175 198 185 193 237 172 186 208 172 246 137 139 151 132 230 199 133 452 409 96 42 757 764 2 1 1 736 0 400 436 182 272 279 195 329 193 220 240 190 166 164 212 213 250 197 ]
T [ 170 182 206 156 172 237 158 227 205 146 186 252 192 232 138 251 223 124 200 151 120 273 102 101 105 347 2 7 9 3 786 42 429 50 64 251 161 183 220 143 186 159 169 263 175 227 199 167 139 176 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 -0.00 0.00 0.02 0.03 -0.01 -0.01 -0.01 0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 0.01 0.01 0.00 0.01 0.01 0.00 0.00 0.00 -0.01 0.00 -0.00 0.02 0.00 0.00 0.01 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.00 0.01 0.01 0.01 -0.00 0.02 0.02 -0.01 -0.01 -0.01 0.02 -0.01 0.02 0.01 0.00 0.00 0.01 0.00 ]
T [ -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.01 -0.00 0.00 -0.00 0.03 0.00 0.01 -0.01 -0.00 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 22984

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2997

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 725

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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