Detailed information of deep learning profile BP000778.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000778.1
Cell line/tissue: HCT116
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BVJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.01 0.00 0.04 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 -0.00 0.03 0.03 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.04 0.02 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 773 803 774 929 940 833 931 789 783 858 896 927 798 830 1016 641 593 1908 748 3472 1 253 1 6 1795 627 682 735 1128 698 1035 652 585 1273 963 815 865 1091 1023 808 805 879 908 903 997 814 816 919 849 896 ]
C [ 815 901 954 847 771 783 897 887 851 832 992 790 981 1019 900 1394 1123 3 2601 1 0 2 3427 3183 199 448 969 1281 724 788 737 785 761 592 877 873 938 856 748 946 1009 870 832 799 836 916 958 912 861 820 ]
G [ 990 823 873 868 818 1008 854 733 830 1032 734 815 815 815 777 541 675 1517 121 6 1 98 27 4 111 1851 1257 1036 771 1020 968 763 1097 835 1006 830 753 877 881 829 742 881 808 941 858 779 850 791 835 882 ]
T [ 901 952 878 835 950 855 797 1070 1015 757 857 947 885 815 786 903 1088 51 9 0 3477 3126 24 286 1374 553 571 427 856 973 739 1279 1036 779 633 961 923 655 827 896 923 849 931 836 788 970 855 857 934 881 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.01 0.01 0.01 0.04 -0.02 0.00 -0.01 -0.02 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.03 -0.02 -0.03 0.03 0.03 -0.01 0.00 0.01 0.01 ]
G [ 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 -0.02 0.00 -0.00 -0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 -0.03 -0.03 0.04 0.02 -0.01 0.00 0.01 -0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2886

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 254

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 200

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 39

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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