Detailed information of deep learning profile BP000776.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000776.1
Cell line/tissue: MCF-7
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BUO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 0.03 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.02 0.02 -0.00 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.03 0.00 0.01 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 678 638 666 654 751 683 715 728 657 652 678 639 649 624 699 610 629 774 758 640 807 612 295 473 511 1260 201 16 2529 2647 0 0 32 778 792 684 565 729 775 634 530 762 772 612 628 640 676 687 725 638 ]
C [ 585 610 643 614 583 645 636 566 646 631 658 599 589 672 695 762 715 756 579 672 679 549 770 845 1300 77 11 6 19 0 6 60 1094 471 371 715 810 562 554 498 868 649 568 598 684 716 635 605 644 675 ]
G [ 634 705 671 694 664 637 628 621 665 724 601 635 678 664 660 615 430 629 675 611 623 553 1021 757 364 133 2437 2628 2 0 2 2115 9 899 1062 612 639 586 648 737 654 551 713 831 602 580 620 697 679 687 ]
T [ 753 697 670 688 652 685 671 735 682 643 713 777 734 690 596 663 876 491 638 727 541 936 564 575 475 1180 1 0 100 3 2642 475 1515 502 425 639 636 773 673 781 598 688 597 609 736 714 719 661 602 650 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 0.01 -0.00 0.02 0.03 -0.02 -0.02 -0.01 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 -0.01 -0.00 -0.02 -0.00 -0.01 0.02 0.01 -0.00 0.00 0.00 ]
G [ 0.01 0.00 0.00 -0.01 0.02 0.02 -0.02 -0.01 -0.02 0.02 -0.02 0.01 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.01 -0.01 0.01 -0.02 0.03 0.01 0.01 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1664

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 906

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 463

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 348

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 203

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 108

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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