Detailed information of deep learning profile BP000779.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000779.1
Cell line/tissue: WTC11
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR285HHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.05 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 0.00 -0.00 0.04 0.03 -0.00 -0.00 0.00 0.01 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.05 0.03 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 278 274 290 277 294 284 275 311 327 323 415 277 283 278 300 168 175 764 262 1369 0 52 0 0 665 222 226 213 443 223 363 332 234 356 283 283 278 299 318 320 340 323 302 296 306 299 296 306 315 302 ]
C [ 399 421 405 433 396 423 452 414 333 377 336 404 386 447 381 541 563 3 1075 0 0 1 1355 1294 47 149 460 613 321 378 334 393 367 249 304 345 319 408 345 398 387 362 383 362 370 383 393 407 389 344 ]
G [ 367 387 370 345 358 364 345 310 394 389 365 352 357 389 348 248 318 601 34 2 0 12 4 2 53 843 567 468 336 404 314 372 481 459 518 496 480 393 429 397 357 383 375 395 384 395 390 395 380 420 ]
T [ 327 289 306 316 323 300 299 336 317 282 255 338 345 257 342 414 315 3 0 0 1371 1306 12 75 606 157 118 77 271 366 360 274 289 307 266 247 294 271 279 256 287 303 311 318 311 294 292 263 287 305 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 0.02 0.01 0.05 -0.02 0.00 -0.03 -0.03 0.01 -0.00 -0.01 -0.00 0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 0.01 -0.03 0.03 -0.04 -0.02 -0.03 0.04 0.03 -0.01 -0.00 0.01 0.01 0.00 0.00 -0.00 0.01 ]
G [ 0.00 0.00 0.00 0.00 0.03 -0.01 0.01 -0.02 -0.01 -0.01 -0.01 -0.00 0.01 0.01 0.01 0.01 0.00 0.00 0.00 ]
T [ -0.01 -0.00 0.00 -0.00 -0.02 -0.03 -0.03 0.05 0.03 -0.01 0.00 0.01 -0.00 -0.01 -0.01 -0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 560

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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