Detailed information of deep learning profile BP000774.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000774.1
Cell line/tissue: Ishikawa
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BSW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 -0.00 -0.00 0.01 0.00 0.06 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.04 0.04 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.07 0.03 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3263 3257 3277 3658 3748 3521 3829 3363 3380 3323 3462 3730 3385 3412 3890 2637 2642 7685 3568 14393 5 908 60 24 6466 2213 3338 2878 3670 3012 3281 3026 3274 4438 3624 3216 3999 3899 4258 3176 3391 3445 3754 3592 3928 3462 3462 3569 3538 3596 ]
C [ 3669 4203 3963 3559 3511 3568 4083 3790 3541 3638 4227 3687 3918 4019 3730 5547 4608 47 10271 6 7 5 14024 12753 720 2320 4144 4857 3665 3589 3710 3946 3339 2855 3591 3919 3401 3830 3479 3968 3908 3636 3595 3559 3624 3946 3821 3877 3709 3597 ]
G [ 4050 3392 3471 3764 3580 4030 3423 3178 3673 4430 3260 3572 3684 3797 3451 2537 2827 6550 578 24 7 457 143 4 473 7146 4418 4730 3678 4240 4298 3384 4144 4055 4067 3928 3497 3727 3543 3686 3545 3705 3527 3837 3561 3348 3546 3401 3475 3703 ]
T [ 3452 3582 3723 3453 3595 3315 3099 4103 3840 3043 3485 3445 3447 3206 3363 3713 4357 152 17 11 14415 13064 207 1653 6775 2755 2534 1969 3421 3593 3145 4078 3677 3086 3152 3371 3537 2978 3154 3604 3590 3648 3558 3446 3321 3678 3605 3587 3712 3538 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 0.02 0.02 0.06 -0.02 0.01 -0.02 -0.03 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.03 0.04 -0.04 -0.03 -0.06 0.04 0.05 -0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.03 -0.00 0.00 -0.04 0.01 -0.01 -0.02 0.00 0.02 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.02 -0.05 -0.05 0.07 0.03 -0.01 0.01 0.01 -0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2867

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1967

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1363

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 631

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 353

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 147

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 122

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 49

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 28

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
Showing 10 profiles of page 1 from 1 pages
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