Detailed information of deep learning profile BP000774.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000774.1
Cell line/tissue: Ishikawa
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BSW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.07 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.04 0.04 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.01 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 3538 3712 3587 3605 3678 3321 3446 3558 3648 3590 3604 3154 2978 3537 3371 3152 3086 3677 4078 3145 3593 3421 1969 2534 2755 6775 1653 207 13064 14415 11 17 152 4357 3713 3363 3206 3447 3445 3485 3043 3840 4103 3099 3315 3595 3453 3723 3582 3452 ]
C [ 3703 3475 3401 3546 3348 3561 3837 3527 3705 3545 3686 3543 3727 3497 3928 4067 4055 4144 3384 4298 4240 3678 4730 4418 7146 473 4 143 457 7 24 578 6550 2827 2537 3451 3797 3684 3572 3260 4430 3673 3178 3423 4030 3580 3764 3471 3392 4050 ]
G [ 3597 3709 3877 3821 3946 3624 3559 3595 3636 3908 3968 3479 3830 3401 3919 3591 2855 3339 3946 3710 3589 3665 4857 4144 2320 720 12753 14024 5 7 6 10271 47 4608 5547 3730 4019 3918 3687 4227 3638 3541 3790 4083 3568 3511 3559 3963 4203 3669 ]
T [ 3596 3538 3569 3462 3462 3928 3592 3754 3445 3391 3176 4258 3899 3999 3216 3624 4438 3274 3026 3281 3012 3670 2878 3338 2213 6466 24 60 908 5 14393 3568 7685 2642 2637 3890 3412 3385 3730 3462 3323 3380 3363 3829 3521 3748 3658 3277 3257 3263 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 0.01 0.01 -0.01 0.03 0.07 -0.05 -0.05 -0.02 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.00 -0.02 -0.01 0.01 -0.04 0.00 -0.00 0.03 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.01 0.05 0.04 -0.06 -0.03 -0.04 0.04 -0.03 0.01 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.03 -0.02 0.01 -0.02 0.06 0.02 0.02 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2867

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1967

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1363

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 631

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 353

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 147

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 122

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 49

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 28

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000772.1 TEAD4 ENCSR000BRP HepG2 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
Showing 10 profiles of page 1 from 1 pages
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