Detailed information of deep learning profile BP000772.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000772.1
Cell line/tissue: HepG2
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BRP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.02 0.00 0.06 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 -0.00 0.03 0.04 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.06 0.03 0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1694 1352 1298 1288 1591 1565 1355 1729 1342 1395 1424 1659 1637 1524 1272 1657 1122 1020 3377 1363 5423 2 273 5 2 2871 889 1144 1121 1664 1048 1449 1386 1056 1689 1689 1240 1716 1584 1778 1434 1369 1516 1623 1392 1647 1358 1370 1388 1415 ]
C [ 1240 1218 1585 1404 1118 1139 1118 1149 1161 1239 1339 1449 1189 1459 1528 1189 1922 1821 10 3925 2 0 2 5351 5062 222 724 1788 2137 1038 1239 1153 1076 1229 1004 1182 1485 1218 1313 1192 1300 1397 1290 1273 1220 1211 1481 1452 1438 1288 ]
G [ 1101 1477 1139 1098 1333 1179 1589 1214 1080 1115 1419 1046 1293 1039 1379 1070 830 950 2022 137 3 0 35 22 1 136 2827 1452 1536 1093 1622 1491 1394 1565 1469 1304 1332 1223 1395 1216 1404 1179 1337 1131 1424 1197 1124 1137 1178 1130 ]
T [ 1393 1381 1406 1638 1386 1545 1366 1336 1845 1679 1246 1274 1309 1406 1249 1512 1554 1637 19 3 0 5426 5118 50 363 2199 988 1044 634 1633 1519 1335 1572 1578 1266 1253 1371 1271 1136 1242 1290 1483 1285 1401 1392 1373 1465 1469 1424 1595 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.03 0.02 0.06 -0.02 0.01 -0.01 -0.02 0.01 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.01 0.01 -0.03 0.03 -0.03 -0.04 -0.05 0.03 0.04 -0.01 0.00 0.01 0.01 ]
G [ 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 -0.02 -0.01 -0.01 -0.02 0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.00 -0.02 -0.04 -0.03 0.06 0.03 -0.00 0.01 0.01 0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1684

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 897

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 795

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 619

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 571

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 515

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 283

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 20

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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