Detailed information of deep learning profile BP000772.1

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This page shows detailed deep learning-derived predictions and motifs for TEAD4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TEAD4
Model ID: BP000772.1
Cell line/tissue: HepG2
Class: TEA domain factors
Family: TEF-1-related factors
JASPAR ID: MA0809.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15561  
Source: ENCSR000BRP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.06 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.04 0.03 -0.00 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.06 0.00 0.02 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1595 1424 1469 1465 1373 1392 1401 1285 1483 1290 1242 1136 1271 1371 1253 1266 1578 1572 1335 1519 1633 634 1044 988 2199 363 50 5118 5426 0 3 19 1637 1554 1512 1249 1406 1309 1274 1246 1679 1845 1336 1366 1545 1386 1638 1406 1381 1393 ]
C [ 1130 1178 1137 1124 1197 1424 1131 1337 1179 1404 1216 1395 1223 1332 1304 1469 1565 1394 1491 1622 1093 1536 1452 2827 136 1 22 35 0 3 137 2022 950 830 1070 1379 1039 1293 1046 1419 1115 1080 1214 1589 1179 1333 1098 1139 1477 1101 ]
G [ 1288 1438 1452 1481 1211 1220 1273 1290 1397 1300 1192 1313 1218 1485 1182 1004 1229 1076 1153 1239 1038 2137 1788 724 222 5062 5351 2 0 2 3925 10 1821 1922 1189 1528 1459 1189 1449 1339 1239 1161 1149 1118 1139 1118 1404 1585 1218 1240 ]
T [ 1415 1388 1370 1358 1647 1392 1623 1516 1369 1434 1778 1584 1716 1240 1689 1689 1056 1386 1449 1048 1664 1121 1144 889 2871 2 5 273 2 5423 1363 3377 1020 1122 1657 1272 1524 1637 1659 1424 1395 1342 1729 1355 1565 1591 1288 1298 1352 1694 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.00 0.01 0.01 -0.00 0.03 0.06 -0.03 -0.04 -0.02 0.00 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.02 -0.01 -0.01 -0.02 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 ]
G [ 0.01 0.01 0.00 -0.01 0.04 0.03 -0.05 -0.04 -0.03 0.03 -0.03 0.01 0.01 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.01 -0.02 -0.01 0.01 -0.02 0.06 0.02 0.03 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1684

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 897

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 795

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 619

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 571

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 515

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 283

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 20

CWM

PFM

     

HCWM

10 profiles found for the same TF (TEAD4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000771.1 TEAD4 ENCSR000BRK K562 Homo sapiens MA0809.3
BP000773.1 TEAD4 ENCSR000BRY H1 Homo sapiens MA0809.3
BP000774.1 TEAD4 ENCSR000BSW Ishikawa Homo sapiens MA0809.3
BP000775.1 TEAD4 ENCSR000BUD A549 Homo sapiens MA0809.3
BP000776.1 TEAD4 ENCSR000BUO MCF-7 Homo sapiens MA0809.3
BP000777.1 TEAD4 ENCSR000BUQ SK-N-SH Homo sapiens MA0809.3
BP000778.1 TEAD4 ENCSR000BVJ HCT116 Homo sapiens MA0809.3
BP000779.1 TEAD4 ENCSR285HHZ WTC11 Homo sapiens MA0809.3
BP000780.1 TEAD4 ENCSR800JRG HepG2 Homo sapiens MA0809.3
BP000781.1 TEAD4 ENCSR817FMN K562 Homo sapiens MA0809.3
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