Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000728.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR945NFL
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.08 -0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.11 -0.00 0.09 -0.00 0.00 0.00 -0.00 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 0.07 -0.00 0.11 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.04 0.00 -0.00 0.00 0.00 0.08 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 436 430 383 405 518 401 420 381 400 412 383 435 463 417 473 374 395 414 593 361 82 1 2323 1 399 17 0 675 197 275 438 371 441 386 391 408 506 438 406 419 434 467 508 478 466 435 465 446 409 383 ]
C [ 709 724 756 769 699 743 657 670 657 753 770 786 745 750 726 804 783 675 499 168 302 2332 4 2177 74 46 0 458 879 1080 796 810 652 750 800 686 622 695 767 781 778 728 681 723 696 679 704 693 670 712 ]
G [ 701 715 722 727 701 668 693 805 895 749 700 728 757 792 717 726 727 837 1020 1778 115 1 3 51 1860 15 2332 976 656 661 742 763 838 780 685 756 802 818 756 718 719 711 722 676 727 820 751 731 809 790 ]
T [ 488 465 473 433 416 522 564 478 382 420 481 385 369 375 418 430 429 408 222 27 1835 0 4 105 1 2256 2 225 602 318 358 390 403 418 458 484 404 383 405 416 403 428 423 457 445 400 414 464 446 449 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.01 0.01 -0.02 -0.03 0.08 -0.09 0.01 -0.04 -0.05 0.04 -0.03 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.02 -0.01 0.00 0.11 -0.04 0.09 -0.04 0.02 -0.06 -0.00 0.03 0.02 0.01 ]
G [ 0.00 0.01 0.01 0.01 0.04 -0.01 -0.06 0.01 -0.03 0.09 -0.05 0.11 0.01 0.00 0.02 0.01 ]
T [ 0.00 -0.00 -0.00 -0.01 -0.03 0.04 -0.05 -0.04 0.01 -0.08 0.08 -0.04 -0.02 0.01 -0.01 -0.00 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000717.1 USF2 ENCSR000DZU GM12878 Homo sapiens MA0526.5
BP000718.1 USF2 ENCSR000ECD H1 Homo sapiens MA0526.5
BP000719.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens MA0526.5
BP000720.1 USF2 ENCSR000EEF HepG2 Homo sapiens MA0526.5
BP000721.1 USF2 ENCSR000EHG K562 Homo sapiens MA0526.5
BP000722.1 USF2 ENCSR145QNL HepG2 Homo sapiens MA0526.5
BP000723.1 USF2 ENCSR229QAN WTC11 Homo sapiens MA0526.5
BP000724.1 USF2 ENCSR359NFW K562 Homo sapiens MA0526.5
BP000725.1 USF2 ENCSR513UQG IMR-90 Homo sapiens MA0526.5
BP000726.1 USF2 ENCSR563FBT A549 Homo sapiens MA0526.5
Showing 10 profiles of page 1 from 2 pages