Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000728.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR945NFL
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 -0.00 0.08 0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.11 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 0.09 -0.00 0.11 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 -0.00 0.08 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 449 446 464 414 400 445 457 423 428 403 416 405 383 404 484 458 418 403 390 358 318 602 225 2 2256 1 105 4 0 1835 27 222 408 429 430 418 375 369 385 481 420 382 478 564 522 416 433 473 465 488 ]
C [ 790 809 731 751 820 727 676 722 711 719 718 756 818 802 756 685 780 838 763 742 661 656 976 2332 15 1860 51 3 1 115 1778 1020 837 727 726 717 792 757 728 700 749 895 805 693 668 701 727 722 715 701 ]
G [ 712 670 693 704 679 696 723 681 728 778 781 767 695 622 686 800 750 652 810 796 1080 879 458 0 46 74 2177 4 2332 302 168 499 675 783 804 726 750 745 786 770 753 657 670 657 743 699 769 756 724 709 ]
T [ 383 409 446 465 435 466 478 508 467 434 419 406 438 506 408 391 386 441 371 438 275 197 675 0 17 399 1 2323 1 82 361 593 414 395 374 473 417 463 435 383 412 400 381 420 401 518 405 383 430 436 ]

Hypothetical CWM

A [ -0.00 -0.01 0.01 -0.02 -0.04 0.08 -0.08 0.01 -0.04 -0.05 0.04 -0.03 -0.01 -0.00 -0.00 0.00 ]
C [ 0.01 0.02 0.00 0.01 0.11 -0.05 0.09 -0.03 0.01 -0.06 -0.01 0.04 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.02 0.03 -0.00 -0.06 0.02 -0.04 0.09 -0.04 0.11 0.00 -0.01 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.03 0.04 -0.05 -0.04 0.01 -0.09 0.08 -0.03 -0.02 0.01 -0.01 -0.00 -0.00 0.00 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000717.1 USF2 ENCSR000DZU GM12878 Homo sapiens MA0526.5
BP000718.1 USF2 ENCSR000ECD H1 Homo sapiens MA0526.5
BP000719.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens MA0526.5
BP000720.1 USF2 ENCSR000EEF HepG2 Homo sapiens MA0526.5
BP000721.1 USF2 ENCSR000EHG K562 Homo sapiens MA0526.5
BP000722.1 USF2 ENCSR145QNL HepG2 Homo sapiens MA0526.5
BP000723.1 USF2 ENCSR229QAN WTC11 Homo sapiens MA0526.5
BP000724.1 USF2 ENCSR359NFW K562 Homo sapiens MA0526.5
BP000725.1 USF2 ENCSR513UQG IMR-90 Homo sapiens MA0526.5
BP000726.1 USF2 ENCSR563FBT A549 Homo sapiens MA0526.5
Showing 10 profiles of page 1 from 2 pages