JASPAR - ATF2 - BP000715.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000715.1
Cell line/tissue:	HepG2
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR908HWZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 1569

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.05	0.00	-0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.05	-0.00	0.00	0.03	-0.00	0.00	0.01	0.00	0.00	]
G [	0.00	0.00	0.01	0.00	0.00	0.03	0.00	0.00	0.02	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.05	0.00	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	0.00	-0.00	-0.00	]

Frequency matrix

A [	360	389	352	371	348	357	332	379	322	338	348	323	372	378	405	375	364	410	760	1	11	1555	0	414	26	141	1522	25	199	229	305	296	339	343	359	300	353	361	314	298	308	348	348	315	342	391	338	336	356	337	]
C [	479	417	443	444	417	405	481	401	416	486	438	503	464	489	381	400	537	241	198	2	3	0	1519	347	22	1412	5	544	742	527	484	469	449	453	396	488	436	475	429	427	495	484	441	460	454	420	451	430	435	446	]
G [	405	451	433	427	458	476	429	473	474	401	469	421	407	400	463	530	414	751	566	0	1426	6	31	770	0	10	22	305	278	452	404	435	427	426	525	479	473	424	439	524	410	416	445	436	423	435	401	436	448	464	]
T [	325	312	341	327	346	331	327	316	357	344	314	322	326	302	320	264	254	167	45	1566	129	8	19	38	1521	6	20	695	350	361	376	369	354	347	289	302	307	309	387	320	356	321	335	358	350	323	379	367	330	322	]

Hypothetical CWM

A [	0.00	0.00	-0.00	0.01	0.02	-0.02	-0.02	0.05	-0.02	0.00	0.00	0.04	0.05	-0.02	-0.01	-0.00	-0.01	-0.00	]
C [	0.01	0.01	0.01	0.00	0.01	0.00	-0.04	-0.04	0.05	-0.00	0.02	0.03	-0.02	0.02	0.02	0.01	0.01	0.00	]
G [	0.01	0.01	0.01	0.02	0.02	-0.02	0.03	0.02	0.00	0.05	-0.03	-0.04	0.00	0.01	0.01	0.01	0.01	0.01	]
T [	-0.00	-0.01	-0.00	-0.00	-0.01	0.05	0.05	0.00	0.01	-0.02	0.05	-0.01	-0.02	0.02	0.00	-0.00	-0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3990

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2846

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2199

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1727

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1122

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 828

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 535

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 328

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 301

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 83

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 67

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2