JASPAR - ATF2 - BP000714.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000714.1
Cell line/tissue:	K562
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR869IUD
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 25093

Contribution weight matrix (CWM)

A [	0.01	0.00	-0.00	0.00	0.06	-0.00	-0.00	0.15	-0.00	0.00	0.00	0.01	0.13	-0.00	-0.00	0.00	0.00	0.00	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.04	0.00	0.00	0.10	-0.00	0.00	0.01	0.00	-0.00	-0.00	]
G [	-0.00	-0.00	0.00	0.01	0.01	-0.00	0.11	0.00	-0.01	0.16	0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.00	0.12	0.01	-0.00	0.02	0.00	0.14	-0.00	-0.00	0.08	0.00	-0.00	0.01	0.01	]

Frequency matrix

A [	7312	7119	7410	7527	7528	7844	7536	7551	7308	7553	7855	7370	7548	7751	8402	8696	8927	8617	9126	8064	8950	17364	728	215	24718	280	115	108	5071	24874	168	4845	7892	7167	6806	7679	7605	7453	7156	8039	7322	7552	7066	7417	7480	7733	7227	7008	7175	7447	]
C [	4666	4794	4908	4993	4660	4671	4603	4752	4434	4819	4903	4918	4850	4961	4486	3636	3848	3701	3868	4624	3452	1688	655	453	48	5799	385	203	19675	14	4121	8006	4888	4731	4655	4057	4517	4969	5048	4527	4974	4780	5046	5211	4850	4777	5132	5287	5087	4971	]
G [	4766	5248	5308	4994	5554	5270	5032	5074	5014	5033	4748	4700	4987	4899	5167	4862	4381	4523	4911	4776	8254	5390	123	20607	218	3978	24575	7	232	139	810	4336	4508	4207	4193	4648	3890	4933	5256	4965	5550	5400	5457	4643	5135	4897	4999	4730	4837	5005	]
T [	8349	7932	7467	7579	7351	7308	7922	7716	8337	7688	7587	8105	7708	7482	7038	7899	7937	8252	7188	7629	4437	651	23587	3818	109	15036	18	24775	115	66	19994	7906	7805	8988	9439	8709	9081	7738	7633	7562	7247	7361	7524	7822	7628	7686	7735	8068	7994	7670	]

Hypothetical CWM

A [	0.02	0.02	0.00	0.02	0.09	-0.07	-0.07	0.15	-0.12	0.03	-0.03	0.06	0.14	-0.08	-0.00	0.01	0.00	0.00	]
C [	-0.01	-0.00	0.01	-0.01	-0.03	0.02	-0.07	-0.09	0.18	-0.01	-0.04	0.12	-0.11	0.03	0.04	0.01	0.00	-0.00	]
G [	-0.00	0.00	0.01	0.04	0.04	-0.11	0.12	-0.04	-0.03	0.16	-0.11	-0.07	0.02	-0.04	-0.01	0.01	-0.01	-0.01	]
T [	0.00	0.00	0.01	-0.00	-0.07	0.12	0.05	-0.04	0.03	-0.10	0.14	-0.08	-0.08	0.09	0.01	0.00	0.02	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1848

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1280

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 348

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 226

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 200

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2